Gene Bind_0933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_0933 
Symbol 
ID6199743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp1067187 
End bp1068704 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content60% 
IMG OID641704930 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001832071 
Protein GI182677925 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCTGGGG TGCGCGGGCC GATGATGTTT TGGGACTGGA ATGGCCATCC AGTGCGGGCT 
TCGCTGGATC GATTCTTCTC TTTGCTTCAG GGCTTTTCCA AGCCGGGCAG GGCGTGGGCA
GCGTGGCTTT TTTTCATTTT CATGAGCCCG GTTTCTTCGT TTGCCGCCGA ACAGGCGCCG
GTTCAGGCCT CGGCGGCATG GCTCGAAACG CGTGGCGAGG GAAGCCGGCT TGTCTTTGAT
CTTTCCGCTC CGGTCGAGGT CAAGGCCATG GTGCTTTCCG CGCCTGATCG TGTGGTCATC
GATCTGCCCG CCGTCGATTT CATGTTCGCG CCACCCACTT TCGCGCCTGC CCCTGCGGCA
CTGGCTCGTC ATCGCCGGGG GCGCCATGCT TCCACCGCGC AGACTGTGGC CCCGAGCGGG
CTCATTGCGG CTTATCGTTT CGGCTCTTTC GCACCCGGCC GATCGCGCAT CGTCATCGAT
CTCAAGGAGC CAGCTCGCGT GATCCGAGCG GGCATGGAAG CCGCTCAAGA CACTTCATCG
TCTGGCCGGG CGCGCCTCGT CATTGTCCTG GCCGCGACCG ATCGGGCGAG TTTTCGGGCG
GCGGCGCAAA ATGGCCGGCA GGAAGTCGCG CTGGCATCCG CTCAGGCCCC GGCGGCTTTG
CCGGACAATG CGCCTATGAT TGCGCCGAAG CCGGGACCCA ATGTGGATCG GCCTGTCATT
GTCATCGATC CGGGCCACGG CGGCGTCGAT AGCGGAGCGA TGGCGGGTAC GCTCGTCGAA
AAAAACCTTG TGCGGGATTT TGCCAAAAGC CTGGCCGATA AGCTTAACGC TAGCCGGCGC
TATCAGATTA TCATGACGCG GGAGGATGAT ATTTTCATTC CCCTCGGAGA GCGGGTCAAG
ATTGCCCAGG CTCATCATGC CGATCTGTTC ATTTCGATCC ACGCCGATAT TCTTTCAGAG
ACGGCGGATG TCGGTGGTGC CACCGTCTAC ACGGTTTCGG ACAAGGCCTC GGATGCCGAG
GCCGCACGTC TCGCCGATAA GGAAAACCAG GCGGATCTTG TCGGCGGTCT CGAAAGTAAG
GAAGAAACGC CGGAAATTAC CGATATTCTA TTCGATTTGA CGCGGCGCGA GACGAGAGCC
TACAGCCATG TTTTCGCGAG GACTTTAGTC GATTACTGGA AAGTCGTCGG CCGGCTCAAC
AAAAACCCTC AGCGCTCGGC GGGTTTTCGC GTTTTGAAGG CGCCTGATGT TCCTTCGGTT
TTGCTCGAAC TCGGCTATTT GTCCAATGAG AATGATCACG CGGCCTTGGC TTCACCGGAA
TGGCGCGGAA AAGTTGTGAC CAAGGTCGCC GAGGCGGTCG ATCGATTTTT CGCCGCGCGC
GGTCCGACTC AAGTTCAAGG GCAGTTTCCA GGACCAGGAC AATTTCAAGG GGAAACGCAA
GCTCGGGCGA GGGGGCACGA TTCCGCATCC ATTCTGCGCG GTACAGCCAC GACCGATCTT
GCCCATGATG CGCATTGA
 
Protein sequence
MSGVRGPMMF WDWNGHPVRA SLDRFFSLLQ GFSKPGRAWA AWLFFIFMSP VSSFAAEQAP 
VQASAAWLET RGEGSRLVFD LSAPVEVKAM VLSAPDRVVI DLPAVDFMFA PPTFAPAPAA
LARHRRGRHA STAQTVAPSG LIAAYRFGSF APGRSRIVID LKEPARVIRA GMEAAQDTSS
SGRARLVIVL AATDRASFRA AAQNGRQEVA LASAQAPAAL PDNAPMIAPK PGPNVDRPVI
VIDPGHGGVD SGAMAGTLVE KNLVRDFAKS LADKLNASRR YQIIMTREDD IFIPLGERVK
IAQAHHADLF ISIHADILSE TADVGGATVY TVSDKASDAE AARLADKENQ ADLVGGLESK
EETPEITDIL FDLTRRETRA YSHVFARTLV DYWKVVGRLN KNPQRSAGFR VLKAPDVPSV
LLELGYLSNE NDHAALASPE WRGKVVTKVA EAVDRFFAAR GPTQVQGQFP GPGQFQGETQ
ARARGHDSAS ILRGTATTDL AHDAH