Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0869 |
Symbol | |
ID | 6200289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 989594 |
End bp | 992917 |
Gene Length | 3324 bp |
Protein Length | 1107 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641704867 |
Product | carbamoyl-phosphate synthase, large subunit |
Protein accession | YP_001832008 |
Protein GI | 182677862 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.292684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.18024 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAAGA GGACGGATAT CGGCACCATC ATGATCATCG GCGCAGGGCC GATCATCATC GGTCAGGCAT GTGAATTCGA TTATTCCGGC ACGCAGGCCT GCAAGGCTCT GCGCCAGGAA GGGTACCGCA TCGTCCTCGT CAATTCCAAT CCGGCAACGA TCATGACCGA TCCGGACATG GCCGATCGCA CCTATATCGA GCCGATCACG CCGGATGTGG TGGCCAAAAT CATTGCCAAG GAGCGCCATG CCGCGCCAGG CGGTTTCGCC CTTTTGCCGA CGATGGGCGG CCAGACCGCG CTGAATTGTG CCCTCTCCCT CAAGAAAATG GGGGTGCTGG AGGATTATGA TGTCGAAATG ATTGGCGCCA CCGCCGAGGC GATCGACAAG GCCGAGGATC GTGAATTGTT CCGCGAGGCC ATGACCAAGA TCGGCCTTTC GACGCCACGC TCGCATCAGA TCAAGACGCT GACCCAGGCG CTCGACATTC TGGACGATAT CGGCCTGCCG GCGATCATCC GCCCTTCCTT CACCATGGGC GGCACCGGCG GCGGCATTGC CTATAACAAG GCGGAATTCA TCGACATTAT CGAGCGGGGC ATCGATGCCT CGCCGACCAA TGAGGTTCTG GTCGAGGAAA GCGTCCTCGG CTGGAAGGAA TATGAAATGG AGGTCGTGCG CGACCGCAAC GACAATTGCA TCATCGTCTG CTCGATCGAA AATATCGATC CTATGGGCGT CCACACCGGC GATTCGATCA CCGTCGCCCC TGCCCTGACG CTGACTGACA AAGAATATCA GGTCATGCGC GACGCCTCGC TCGCCGTCTT GCGCGAGATC GGCGTCGAGA CGGGTGGCTC CAATGTCCAA TTCGCGGTCA ATCCGAGCGA CGGCCGGATG ATCGTCATCG AAATGAATCC GCGCGTCTCG CGCTCTTCGG CTTTGGCGTC GAAGGCGACT GGATTTCCGA TCGCCAAGGT CGCCGCGAGA CTTGCCGTCG GCTATACGCT CGATGAAATC GCCAATGATA TTACCGGCGG CGCGACGCCG GCCTCCTTCG AGCCGACGAT CGATTATGTC GTCACCAAAA TTCCGCGCTT CGCCTTCGAG AAATTTCCTG GCGCCGAGGA TACACTGACG ACGGCGATGA AATCCGTCGG CGAGAGCATG GCGATTGGCC GCACCTTCGC CGAAAGCCTG CAAAAAGCTT TGCGCTCGCT CGACACCGGC CTCACCGGCC TCGACGAGAT CGCCATAGAC GGCCTCGGTC TTGGCGATGA CATGAATATA CTGCGTGGCG CGCTCGGACG GCCGACGCCC GACCGTCTGC TGATCGTCGC GCAGGCCATG CGCGAGGGCA TGAGCGTCGA AGAAATCCAC GAGGCTTGCG CCATCGACCG CTGGTTCCTC GAACAGATCG AGGGCATTTT GAAGCTGGAG GCCAAGGTGC GCGCCTTCGG CCTGCCTGAG GATGCCGCCA ATTTGCGGCT GTTGAAGGCC GCCGGCTTTT CCGACACGCG CCTTTCAACC TTGGCCAAGG TGACGCCGCA GGAAGTCGCG GCGCTCCGCG CGAAACTCGA TGTGCATCCT GTCTTCAAGC GCATCGATAC CTGCGCCGCT GAATTTGCCT CGCCAACCGC CTATCTCTAT TCGACCTATG CACCACCTTT CGCGGGTGCG CCCGTCTGCG AAGCAAAGCC CAGCCCACGC GACAAAGTGG TCATTCTTGG CGGCGGGCCG AACCGGATCG GCCAAGGCAT CGAATTCGAT TATTGCTGCT GTCAGGCTTG TTTCGCCCTG CATGATGCGG GTTTCGAGAC GATCATGATC AACTGCAATC CGGAAACGGT TTCAACCGAC TATGACACCT CCGACCGGCT CTATTTCGAG CCCCTGACGC CCGAGGATGT GCTTGCCATT CTCGCCAAGG AGCAGGAAGC CGGCACCCTG AAGGGCGTGA TTGTCCAATT TGGCGGCCAA ACGCCCCTGA AACTTGCTCA TACTCTTGAA AAAGCGGGTA TTCCCATCCT TGGCACCTCG GTCGACTCGA TCGACCTTGC CGAAGACCGC GACCGCTTCA AATGGCTTCT CGATAAAGTC GGCCTCAAAC AGCCGATGAA CGGCATCGCT TATTCGGTCG AGCAGTCCCG CCTCGTCGCC TCTGATCTCG GCCTGCCGCT CGTCGTGCGC CCCTCCTATG TGCTGGGCGG CCGAGCCATG GCGATCATCC GCGACAATGC ATCTTTCGAT GATTATCTGC TCGGCACTTT GCCGGGGCTC GTGCCCTCCG ATATCAAGGC CCGCTATCCC AACGACAAGA CCGGTCAGAT CAATACGGTG CTCGGCAAGA ATCCGCTGCT GTTCGACCGC TACCTTTCCG ACGCCGTTGA AGTCGATGTC GACGCCCTCT GCGACGGCAA GGATGTCTTC ATCTGCGGCA TTATGGAACA TATCGAGGAA GCCGGCATTC ATTCCGGCGA TAGCGCCTGC TCGCTGCCGC CGCGCTCGCT CGGGCCGGAC AAGATCGCCG CGCTCGAGGA ACAGACGCGC AAGTTGGCCC TGGCACTCAA GGTCGGCGGC TTCATGAATG TCCAATATGC CTTGAAGGAT GGCGAGATCT ACGTGCTGGA GGTCAATCCG CGCGCCGCGC GAACAGTGCC CTTCGTCGCC AAGGTCATCG GCATTCCACT CGCCAAAATC GCCTCGCGGA TCATGGCCGG TGAAAACCTG GCGAGCTTCC GTCTCGAACC GAAGAAACTG CGTCATGTCG GCGTCAAGGA AGCCGTCTTT CCCTTCGCTC GTTTCCCCGG CGTCGATACA GTCCTCGGCC CCGAAATGCG CTCGACCGGC GAGGTCATGG GCATTGATTT CTCCTTTGCC ATCGCCTTCG CCAAAAGCCA GCTCGGCGGC GGCACCAAGG TGCCGACCAA GGGCACGGTC TTTGTTTCTG TGCGCGATGA GGACAAGCCG CGTGCCGTCG ACACGATCAA GCTGCTGATC AATCTGGGCT TCAAGATCTG CGCGACGGGC GGCACATCCC GTTTCCTCGA GGGGGAAGGC ATAGAAGCGC AGCGCCTGAA CAAAGTTTCG GAAGGGCGCC CGCATGTCGT CGACGCGATC AAGAACGGCG CGATCCAGCT CGTTCTGAAC ACGACCGAGG GGGCGCAGGC ACTCGCCGAT TCACGCTCCT TGCGGAGGGC GGCGCTGCTG CATAAAGTTC CCTATTATAC AACGCTTGCC GGTGCCATAG CGGCGGCCCA GGGAATCAGG GCCTATCTCG CCGGGGACCT GGAAGTTCAT GCCCTGCAGG ATTATTTCGC CTGA
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Protein sequence | MPKRTDIGTI MIIGAGPIII GQACEFDYSG TQACKALRQE GYRIVLVNSN PATIMTDPDM ADRTYIEPIT PDVVAKIIAK ERHAAPGGFA LLPTMGGQTA LNCALSLKKM GVLEDYDVEM IGATAEAIDK AEDRELFREA MTKIGLSTPR SHQIKTLTQA LDILDDIGLP AIIRPSFTMG GTGGGIAYNK AEFIDIIERG IDASPTNEVL VEESVLGWKE YEMEVVRDRN DNCIIVCSIE NIDPMGVHTG DSITVAPALT LTDKEYQVMR DASLAVLREI GVETGGSNVQ FAVNPSDGRM IVIEMNPRVS RSSALASKAT GFPIAKVAAR LAVGYTLDEI ANDITGGATP ASFEPTIDYV VTKIPRFAFE KFPGAEDTLT TAMKSVGESM AIGRTFAESL QKALRSLDTG LTGLDEIAID GLGLGDDMNI LRGALGRPTP DRLLIVAQAM REGMSVEEIH EACAIDRWFL EQIEGILKLE AKVRAFGLPE DAANLRLLKA AGFSDTRLST LAKVTPQEVA ALRAKLDVHP VFKRIDTCAA EFASPTAYLY STYAPPFAGA PVCEAKPSPR DKVVILGGGP NRIGQGIEFD YCCCQACFAL HDAGFETIMI NCNPETVSTD YDTSDRLYFE PLTPEDVLAI LAKEQEAGTL KGVIVQFGGQ TPLKLAHTLE KAGIPILGTS VDSIDLAEDR DRFKWLLDKV GLKQPMNGIA YSVEQSRLVA SDLGLPLVVR PSYVLGGRAM AIIRDNASFD DYLLGTLPGL VPSDIKARYP NDKTGQINTV LGKNPLLFDR YLSDAVEVDV DALCDGKDVF ICGIMEHIEE AGIHSGDSAC SLPPRSLGPD KIAALEEQTR KLALALKVGG FMNVQYALKD GEIYVLEVNP RAARTVPFVA KVIGIPLAKI ASRIMAGENL ASFRLEPKKL RHVGVKEAVF PFARFPGVDT VLGPEMRSTG EVMGIDFSFA IAFAKSQLGG GTKVPTKGTV FVSVRDEDKP RAVDTIKLLI NLGFKICATG GTSRFLEGEG IEAQRLNKVS EGRPHVVDAI KNGAIQLVLN TTEGAQALAD SRSLRRAALL HKVPYYTTLA GAIAAAQGIR AYLAGDLEVH ALQDYFA
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