Gene Bind_0837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_0837 
Symbol 
ID6200266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp937793 
End bp940072 
Gene Length2280 bp 
Protein Length759 aa 
Translation table11 
GC content57% 
IMG OID641704835 
Productlipopolysaccharide biosynthesis protein 
Protein accessionYP_001831976 
Protein GI182677830 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.36999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTAG TGGCAAACGA CATCCATGAA AATCGGCCGC GAGGATCGGT GGTGCCATCG 
ACCTCCCAGG GGCAAGAGGG TAGCCAGACC CTATTGGAAG TCATTGTCCA GCGGAAATGG
TCGATTCTTG CCTTTGCAAT CGGCATGGCG ATCTTGGCCT CGTTCTATGT TTCTTTCATC
CCGCCGCGCT ATACGGCGAC GGCCTCAGTG ATGCTCGACG GACGGCAACT TCGGCTCATC
AGCAATGATC AATTGGTGTC GGGGCAGTCC CTCGACGAGG TGCAGATCCG CAGCATGCTG
GAGGTCTTCA ATTCCAAGAC CCTCGCCAAA ACTGTCGTCA CCCAAAATGG TTTGAACAAG
CTTCCCGAAT TCTGCGCAGA CACTCCGTCA TTTTTTGAGC AGGTGAGGGA TTCTCTTTTC
AGCAAAATTC TGCACCGTGC CTCGGGATCT GGGGCTCCCG TTGCTTGTGA GACGAGCGTC
GAAAACGCGG CGAGACAATT GCTCGGCATG GTGACCGCCA CGAACGAAGG GCGGTCCTAT
ATTATCCGCA TTCAAATCGA GGCGGGAGAT CCGGAAGTCG CGGCCAATAT TGCCAATGCC
TATGCCAATG CCTTTGTGGC CGACCGCTTT GAACGGCACA CGGAATTGGC CGAAAAGGCG
CGTCAGTGGT TGATCGGTTA TATTGATCGA TTGGGCCGGC AAACCGCTCA GGCGGATGCG
GCCGTCGCGC AATATCGTTC CGAACATCAT CTGATCCCCT TGCGGGGAGA GACCCTGGCA
ACGCAAAATC TCGGCGATGT CAATGGGCAA TTGTCTGCTG TCGAAAGCGA GATCACGCAG
AAACAAAGCC TGTTGTCGCA AATGACAACG GTGATGAAGA GCAATGGCAA TATCATGGCC
ATTGCGCCTC TCGTCAATTC GTCACTGGTC AATGCTCCTT TGCTTCGCAA TCTTGTCGAG
AAGGAAGCTA CGCTTTCCAG CCGGGATGCC GAATTGCGGA CACAATATGG CAAAGCCCAT
CCGCAGGTCA TCGCCACGGG GGCATTGCTT GCTCAAACGC ATCGTCAGAT CCTGGCCGAA
ATCACCAAGA CCATGGATAC GCTGGGGCAG GAAATCACCG CCCTCCAGGC GCGCCGGACG
TTGCTGACCT CGCAACTTTC GAGCTTGCAG TCGCGCGTTG GCCAGCAGGG CGATGAAGAC
GTGCAATTGC AGGAATTGCT GCGTGCGGCC GAGACGAGCC GGCATATTTA TCAAAGCGCC
TTGACACGTC TGAAGGAAAT TGAAGTCGAG CAGGGTGTGT CACGGCCAGA CTCCCAACTT
GCGACAGAAG CGACCCCGCC GCCGTTTCCC ATCTATCCTC GCAAGTCTTT GATGGTGGTT
GGCGCTTTTC TCGCCGGTCT CTGCCTTGGT ACCGGAGCGG CTTTCGGGTT GAGCTTGCGG
CAGCTTTCCT TCCGCAATGC CAAGCATATC GAATTCGAGA CCGGATTGCC GATGCTTGGG
GTGTTTGCGG TGCCGCCGGC ACACATCCTT CCTCAGGATG TCGCGCTCGA TGCGCCTTTG
TCGATCGAGG CGGAGTGTCT GCAAAAGATC CTGGTCAATA TTTTGCGGGC TCGCTCGGAA
CAAACCGGTA GCCTTGCCAA GGTTGTCCTG ATCACCTCCG CTCTGCCTGG GGAAGGCAAG
ACGTCGTTCA GTCTCGCACT CGGCCGCGCG GCCGTCCGGG CGGGTCTTTC GACCATGTTG
ATCGATTGCG ATCTGCGGCG CCCCACGGTC CTTCAGAAAT TGCGTGGTTA TATCGAGCCG
CGATCATCGT TGGCTTCGGG ACGTGATCGC CGTGACCCCA ATTATCTTGA TTACCAGAAT
ATGATTGTGA CCGATCACGA TTCGGCATTG AAGATCATTC CTCTTGCCGA GAAGGAGGCC
AGCAGCCCTC ATGTGATCAT CGGAGCGCCG GCCATGAAGC AAATGCTGCA AGGCCTCCGC
CGTACCTATG ATCTCGTTCT CATCGATACG CCGCCTTTGC TGGCAGCATC CGATGCCCTG
CCGCTGTCTT ACCTCGTCGA CGAAGTCATC GTCCTCGTCG ATTGGCGGAC GACACCGCGT
GACGCGGTCA GTGAGGCGAT CGAAATGCTT CGGCGCCATG ATGCCCCAGT GGGGGGGATC
GTTCTTGGCA AGGTCGATCT GGAGAAATAT ACGAAAGCGG CCGGTGCCGG TTCGTATGCG
CGCAGTTATT ATCATTATGG CCCGTCCAAG CAGGTGGTAC GGTCTGAACG GGTGGATTGA
 
Protein sequence
MNLVANDIHE NRPRGSVVPS TSQGQEGSQT LLEVIVQRKW SILAFAIGMA ILASFYVSFI 
PPRYTATASV MLDGRQLRLI SNDQLVSGQS LDEVQIRSML EVFNSKTLAK TVVTQNGLNK
LPEFCADTPS FFEQVRDSLF SKILHRASGS GAPVACETSV ENAARQLLGM VTATNEGRSY
IIRIQIEAGD PEVAANIANA YANAFVADRF ERHTELAEKA RQWLIGYIDR LGRQTAQADA
AVAQYRSEHH LIPLRGETLA TQNLGDVNGQ LSAVESEITQ KQSLLSQMTT VMKSNGNIMA
IAPLVNSSLV NAPLLRNLVE KEATLSSRDA ELRTQYGKAH PQVIATGALL AQTHRQILAE
ITKTMDTLGQ EITALQARRT LLTSQLSSLQ SRVGQQGDED VQLQELLRAA ETSRHIYQSA
LTRLKEIEVE QGVSRPDSQL ATEATPPPFP IYPRKSLMVV GAFLAGLCLG TGAAFGLSLR
QLSFRNAKHI EFETGLPMLG VFAVPPAHIL PQDVALDAPL SIEAECLQKI LVNILRARSE
QTGSLAKVVL ITSALPGEGK TSFSLALGRA AVRAGLSTML IDCDLRRPTV LQKLRGYIEP
RSSLASGRDR RDPNYLDYQN MIVTDHDSAL KIIPLAEKEA SSPHVIIGAP AMKQMLQGLR
RTYDLVLIDT PPLLAASDAL PLSYLVDEVI VLVDWRTTPR DAVSEAIEML RRHDAPVGGI
VLGKVDLEKY TKAAGAGSYA RSYYHYGPSK QVVRSERVD