Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0837 |
Symbol | |
ID | 6200266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 937793 |
End bp | 940072 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641704835 |
Product | lipopolysaccharide biosynthesis protein |
Protein accession | YP_001831976 |
Protein GI | 182677830 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0489] ATPases involved in chromosome partitioning [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.36999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTAG TGGCAAACGA CATCCATGAA AATCGGCCGC GAGGATCGGT GGTGCCATCG ACCTCCCAGG GGCAAGAGGG TAGCCAGACC CTATTGGAAG TCATTGTCCA GCGGAAATGG TCGATTCTTG CCTTTGCAAT CGGCATGGCG ATCTTGGCCT CGTTCTATGT TTCTTTCATC CCGCCGCGCT ATACGGCGAC GGCCTCAGTG ATGCTCGACG GACGGCAACT TCGGCTCATC AGCAATGATC AATTGGTGTC GGGGCAGTCC CTCGACGAGG TGCAGATCCG CAGCATGCTG GAGGTCTTCA ATTCCAAGAC CCTCGCCAAA ACTGTCGTCA CCCAAAATGG TTTGAACAAG CTTCCCGAAT TCTGCGCAGA CACTCCGTCA TTTTTTGAGC AGGTGAGGGA TTCTCTTTTC AGCAAAATTC TGCACCGTGC CTCGGGATCT GGGGCTCCCG TTGCTTGTGA GACGAGCGTC GAAAACGCGG CGAGACAATT GCTCGGCATG GTGACCGCCA CGAACGAAGG GCGGTCCTAT ATTATCCGCA TTCAAATCGA GGCGGGAGAT CCGGAAGTCG CGGCCAATAT TGCCAATGCC TATGCCAATG CCTTTGTGGC CGACCGCTTT GAACGGCACA CGGAATTGGC CGAAAAGGCG CGTCAGTGGT TGATCGGTTA TATTGATCGA TTGGGCCGGC AAACCGCTCA GGCGGATGCG GCCGTCGCGC AATATCGTTC CGAACATCAT CTGATCCCCT TGCGGGGAGA GACCCTGGCA ACGCAAAATC TCGGCGATGT CAATGGGCAA TTGTCTGCTG TCGAAAGCGA GATCACGCAG AAACAAAGCC TGTTGTCGCA AATGACAACG GTGATGAAGA GCAATGGCAA TATCATGGCC ATTGCGCCTC TCGTCAATTC GTCACTGGTC AATGCTCCTT TGCTTCGCAA TCTTGTCGAG AAGGAAGCTA CGCTTTCCAG CCGGGATGCC GAATTGCGGA CACAATATGG CAAAGCCCAT CCGCAGGTCA TCGCCACGGG GGCATTGCTT GCTCAAACGC ATCGTCAGAT CCTGGCCGAA ATCACCAAGA CCATGGATAC GCTGGGGCAG GAAATCACCG CCCTCCAGGC GCGCCGGACG TTGCTGACCT CGCAACTTTC GAGCTTGCAG TCGCGCGTTG GCCAGCAGGG CGATGAAGAC GTGCAATTGC AGGAATTGCT GCGTGCGGCC GAGACGAGCC GGCATATTTA TCAAAGCGCC TTGACACGTC TGAAGGAAAT TGAAGTCGAG CAGGGTGTGT CACGGCCAGA CTCCCAACTT GCGACAGAAG CGACCCCGCC GCCGTTTCCC ATCTATCCTC GCAAGTCTTT GATGGTGGTT GGCGCTTTTC TCGCCGGTCT CTGCCTTGGT ACCGGAGCGG CTTTCGGGTT GAGCTTGCGG CAGCTTTCCT TCCGCAATGC CAAGCATATC GAATTCGAGA CCGGATTGCC GATGCTTGGG GTGTTTGCGG TGCCGCCGGC ACACATCCTT CCTCAGGATG TCGCGCTCGA TGCGCCTTTG TCGATCGAGG CGGAGTGTCT GCAAAAGATC CTGGTCAATA TTTTGCGGGC TCGCTCGGAA CAAACCGGTA GCCTTGCCAA GGTTGTCCTG ATCACCTCCG CTCTGCCTGG GGAAGGCAAG ACGTCGTTCA GTCTCGCACT CGGCCGCGCG GCCGTCCGGG CGGGTCTTTC GACCATGTTG ATCGATTGCG ATCTGCGGCG CCCCACGGTC CTTCAGAAAT TGCGTGGTTA TATCGAGCCG CGATCATCGT TGGCTTCGGG ACGTGATCGC CGTGACCCCA ATTATCTTGA TTACCAGAAT ATGATTGTGA CCGATCACGA TTCGGCATTG AAGATCATTC CTCTTGCCGA GAAGGAGGCC AGCAGCCCTC ATGTGATCAT CGGAGCGCCG GCCATGAAGC AAATGCTGCA AGGCCTCCGC CGTACCTATG ATCTCGTTCT CATCGATACG CCGCCTTTGC TGGCAGCATC CGATGCCCTG CCGCTGTCTT ACCTCGTCGA CGAAGTCATC GTCCTCGTCG ATTGGCGGAC GACACCGCGT GACGCGGTCA GTGAGGCGAT CGAAATGCTT CGGCGCCATG ATGCCCCAGT GGGGGGGATC GTTCTTGGCA AGGTCGATCT GGAGAAATAT ACGAAAGCGG CCGGTGCCGG TTCGTATGCG CGCAGTTATT ATCATTATGG CCCGTCCAAG CAGGTGGTAC GGTCTGAACG GGTGGATTGA
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Protein sequence | MNLVANDIHE NRPRGSVVPS TSQGQEGSQT LLEVIVQRKW SILAFAIGMA ILASFYVSFI PPRYTATASV MLDGRQLRLI SNDQLVSGQS LDEVQIRSML EVFNSKTLAK TVVTQNGLNK LPEFCADTPS FFEQVRDSLF SKILHRASGS GAPVACETSV ENAARQLLGM VTATNEGRSY IIRIQIEAGD PEVAANIANA YANAFVADRF ERHTELAEKA RQWLIGYIDR LGRQTAQADA AVAQYRSEHH LIPLRGETLA TQNLGDVNGQ LSAVESEITQ KQSLLSQMTT VMKSNGNIMA IAPLVNSSLV NAPLLRNLVE KEATLSSRDA ELRTQYGKAH PQVIATGALL AQTHRQILAE ITKTMDTLGQ EITALQARRT LLTSQLSSLQ SRVGQQGDED VQLQELLRAA ETSRHIYQSA LTRLKEIEVE QGVSRPDSQL ATEATPPPFP IYPRKSLMVV GAFLAGLCLG TGAAFGLSLR QLSFRNAKHI EFETGLPMLG VFAVPPAHIL PQDVALDAPL SIEAECLQKI LVNILRARSE QTGSLAKVVL ITSALPGEGK TSFSLALGRA AVRAGLSTML IDCDLRRPTV LQKLRGYIEP RSSLASGRDR RDPNYLDYQN MIVTDHDSAL KIIPLAEKEA SSPHVIIGAP AMKQMLQGLR RTYDLVLIDT PPLLAASDAL PLSYLVDEVI VLVDWRTTPR DAVSEAIEML RRHDAPVGGI VLGKVDLEKY TKAAGAGSYA RSYYHYGPSK QVVRSERVD
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