| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0796 |
|---|
| Symbol | |
|---|
| ID | 6198411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 889086 |
|---|
| End bp | 890120 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641704793 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001831935 |
|---|
| Protein GI | 182677789 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATG AGCAAGCGCT GATCCTTGTG ACCGGTGTCG CGGGTTTCAT CGGGTCTTTC
CTAGCCGCGC GGCTTCTCGA TGAGAATCGG GAAGTGGTCG GAATCGACAA TATGAATGCC
TATTATGATC CGGCTTTGAA ACGGGCGCGC CTCGCACAAC TCTCGTCGCG TGCGGGCTTT
CGGTTTCTTG AAGGCGATCT CGTCGATACG GATTTCATGC GCGCCGCGTT CACCGAGACG
CGGCCCAAAA TCGTCGTCAA TCTCGCGGCG CAGGCGGGGG TGCGTTATTC ACTCGAAAAC
CCGCGTTCCT ATGTCGATTC CAATATTGTC GGCTTTCTCA ATATTCTGGA AAATTGCCGT
GCGATGGGAG TCGAGCATCT GGTCTATGCC TCGTCGAGTT CTGTCTATGG CGCCAACCCG
ACCATGCCCT TTTCCACGCG GGACAATGTC GATCATCCCG TAAGCCTTTA TGCTGCCTCG
AAAAAGGCTA ATGAGTTGAT GGCGCATTCT TATGCGCATC TCTATGGGCT GCCTGTGACG
GGCCTTCGGT TTTTTACCGT CTATGGCCCG TGGGGACGCC CTGACATGGC CTATTTCATC
TTCACGCGGA AAATTCTCGC TGGCGAACCG ATCGATGTGT TTAATCACGG CGATCTCTCG
CGTGATTTCA CTTATATCGA CGATATCGTC GATGGCGTGC GCAAAGTCAT GGATCACGTG
CCGAAAGGCG ATCCGAATTG GGCGACCAAT GGGGCTTCAC CGGCGACCAG CACCGCGCCC
TACCAGCTTT ATAATATTGG CAATAACCGG CCGGAACGCC TGCTGGATAT GATCGAAACC
CTTGAGACCC TGTTGGGCCG TAAGGCGGAA AAACGTTTTC TGCCCCTCCA ACCGGGTGAT
GTCCTTGCGA CTTGGGCCGA TATAGACGAT CTCCAAAAGG ATACGGGCTT TGCGCCGAAA
ACCACGCTTG CTCAGGGCCT TTCGCATTTT GTTGATTGGT ATCGCGATTT CTACAAGATC
GCCGGCAAGA GTTAG
|
|---|
| Protein sequence | MNDEQALILV TGVAGFIGSF LAARLLDENR EVVGIDNMNA YYDPALKRAR LAQLSSRAGF
RFLEGDLVDT DFMRAAFTET RPKIVVNLAA QAGVRYSLEN PRSYVDSNIV GFLNILENCR
AMGVEHLVYA SSSSVYGANP TMPFSTRDNV DHPVSLYAAS KKANELMAHS YAHLYGLPVT
GLRFFTVYGP WGRPDMAYFI FTRKILAGEP IDVFNHGDLS RDFTYIDDIV DGVRKVMDHV
PKGDPNWATN GASPATSTAP YQLYNIGNNR PERLLDMIET LETLLGRKAE KRFLPLQPGD
VLATWADIDD LQKDTGFAPK TTLAQGLSHF VDWYRDFYKI AGKS
|
|---|
| |