Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0695 |
Symbol | ddl |
ID | 6198336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 777866 |
End bp | 778789 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641704692 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_001831834 |
Protein GI | 182677688 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.686209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.293576 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGAAAC ATGTGGCCGT GCTGATGGGC GGTCTTTCGG CCGAGCGCGA GGTCTCGCTG TGCTCGGGGG CGGCTTGTGC TGAGGCTCTG CGCGGCGAGG GGTTCGAGGT CACGGAAGTG GATGTCGATC GCCAGATCGG CGAAAGGCTC GCGGCCTTGC GGCCTGATGT CGCTTTCAAT GCTTTGCATG GCCGATTCGG CGAGGATGGC ATCATCCAGG GCGTTCTGGA AATGCTGGCC ATTCCCTATA CGCATTCGGG CGTTCTCGCC TCGGCGCTCG CCATGCGCAA GGACCGTGCG CGCGACGTTC TGGCCGCTGC GGGTGTCCCG ATTGCCAAGG GCGTCACGGT TGACCGGCTG GAGGCGGCGC AACGCCATAT TTTGCCACCG CCTTACGTGA TCAAGCCGCT CGGCGAAGGC TCTTCCTTCG GCGTGTTCAT CGTGCGGGAG GATCAGGCCT ATCCGCCACA AGAGTTAACG CGTTCCGACT GGGCTTTCGG TAACCGTGTT CTGGTTGAAT CCTATATAGG AGGGCGCGAG CTGACCTGTG CCGTCATCGG CGAAAAAGCT CATGATGTCA TAGAGATAAA GGCCGTTGGC GGCGGCTGGT ACGATTATGA CGCCAAATAT CGAAAAGGTG GATCTATCCA CATCCTTCCT GCCGAACTTA AACGAAATAT TTACCAAAAT GTTCAACTCT TATCGCTCAA GGCACATAAG GCCCTCGGCT GCCGTGGCGT GAGCCGGACT GATTTCCGTT ACGACGACCG TCCCGAAGGG ACGGGCGAAT TGATCGTCCT GGAAGTCAAC ACTCAGCCCG GCATGACGGA GACCTCCTTG CTGCCAGAAA TTGCGGCCTA TGCCGGTCTC TCGTTTGGTG AGCTTGTTCG ATGGATGGTG GACGACGCCT CCTGCGATCG TTGA
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Protein sequence | MAKHVAVLMG GLSAEREVSL CSGAACAEAL RGEGFEVTEV DVDRQIGERL AALRPDVAFN ALHGRFGEDG IIQGVLEMLA IPYTHSGVLA SALAMRKDRA RDVLAAAGVP IAKGVTVDRL EAAQRHILPP PYVIKPLGEG SSFGVFIVRE DQAYPPQELT RSDWAFGNRV LVESYIGGRE LTCAVIGEKA HDVIEIKAVG GGWYDYDAKY RKGGSIHILP AELKRNIYQN VQLLSLKAHK ALGCRGVSRT DFRYDDRPEG TGELIVLEVN TQPGMTETSL LPEIAAYAGL SFGELVRWMV DDASCDR
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