Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0604 |
Symbol | |
ID | 6201214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 672567 |
End bp | 678041 |
Gene Length | 5475 bp |
Protein Length | 1824 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641704595 |
Product | alpha-2-macroglobulin domain-containing protein |
Protein accession | YP_001831744 |
Protein GI | 182677598 |
COG category | [R] General function prediction only |
COG ID | [COG2373] Large extracellular alpha-helical protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGTCT CAGCGATTCG CGTATTCGTC GCCGGGCTGC TTGTCACGCT CGTGTCTCTC CTTCCCGCTA TCGCTGATGC CAAGCGCGAG GCTGTGCTCA CTCAGGATGT CGATTATTTC GGTTTTGACC TGCGGACAGA GCAAAATGTC ACGCTCGATC AATGTCAGGC TTCTTGCCTT GGCAATAAGG CTTGCAAGGC TTTTACCTAT AATCCCAAGG TGAAATGGTG TTTCTTGAAA TCCGACTTCG ATCGGATGAA CCAGGCACCG GGCGCGATCG CTGGCAAGAT AATCGATTCC GAAAGCCGTG AAGCCGATCT CGGCGCTGCG CCGAAGCTGG ATTTCATCTC CAATGAATTG ATCCGACAGG CACGCGACTT CAAAGCCAAT TTGCCGCGGG GCAGGGCCCC TTTGGGTGGT GGAGCGCCGG CACTGATCCA GCAAGCGCGC AAGGATCTTA CGAACGGAAA GAGCGACGCG GCGTTGGAGA GCTTGCGTTT GGCACTAGCA ACCGCTCCCG ACAAGCCGGA GCTGTGGAGC GAAGTGGCGC GCGCTGGCAA TGAGCTTGGC AAGACGACCT CTCTGGCGAG CCAGATGGCG CTTGTGGCAC TCAATGGCTA TGCCGTGACG CGGACGGCGT CGATGCGTGC CAGCGCGCTG GTGGAGCTCG CGGTCGCGCT GGAAAAGTCA GAAAATTATC GCGCCGCGCT CAATGCCTAT AAGGCGAGCC TTGCGCTTGT GAACGCGAAA TCCGTTGAGG CGGCTTATCT CGATCTCAAG GCGCGGCGCG GATTTCGGAT CATCGATCAT AGCATCGATA AAGATACCAT CTCGCCCCGT GCTTGCGTCC AATTCTCCGA GGCTTTGGTG AAAGCGGGCG TCGATTATGC CCCGTTCCTC ACGCTCGATG GAAAAGCCCC TAAGGCCTTC GAGGCCAAGG ATCATGAAAT TTGTGTCGAG GGCCTTGCCC ATGGCCAACA CTATAAACTG GGTTTGAGAA GCGGCCTGCC ATCTTCCGTC GGGGAGGTTT TGGAAGCACC GGTCAGCCTC GACATCTATG TCCGGGATCG CTCGCCGCTT GTGCGTTTTA CTGGAGATAA TTTCGTTTTG CCGGGCTCTG CGCGGCGGGG CATTCCGATC GTGTCGGTAA ATACTGACAG AGCCGATTTG AAACTCTACC GGATCGGTGA TCGTGGTCTC GCCGGGCTTT TGACGAATAC GCAGTTCCTG ACCCAACTCG ATCGTTACAG CGCGCAGCGT ATTCAGGACG AAAGTGGTGA ACTCGTCTGG CAGGGCGCGA TCGATATACA GCAGGATCTC AACAAGGAGG TCGTGACCAG CTTTCCCGTC GATGAGGCCT TGCCGAAACG CCAACCCGGC GTTTATGTCC TGACCGCGGC TTCGCCGCAT ACGGCGAAGG AGGATTCGGA TACACAGGCC ACACAATGGT TTGTCGTTTC GGATCTTGGC ATTACCACTT ATGCCGGGAC CGATGCTCTC TCCATTTTCG TTCGTTCGCT CGCTTCCGCA AAGCCGATGG CGGACGTGGA CTTGCAACTC CTGGCGAAAA ACAACGAAAT TCTCGGCACG GCCAAGACCG ATGCCGAAGG GCGCGCCACT TTCTCCGCGG GGCTCATGCG CGGCACTGGC GGATTGGCGC CCACAATCAT CATGGCCCGG GCAGGCGGCT CTGATTTCGT CTTTCTGGAT ATGACGCGCG CGGGATTTGA TCTTTCCGAC CGTGGCGTGG CTGGCCGGGA ATCGCCCGGC GCGATTGATC TTCTCGCCTG GACAGAACGT GGGATCTACC GTGTCGGCGA AACCGTACAC GCGACGGCTC TCGCGCGAGA TGACAGAAGC GTGGCCATCG CGAACCTTCC CCTGACCTTC GTCTTCACAC GTCCTGATGG GGTCGAGGAT CGCCGTTTCG TGCGCGATGG GGGGACGGCT GGCGGCTATA CGCTGGATTT GCCCTTGCCC GACAATGCTC TGCGCGGCAC CTGGACGATG AAGGTCTTCG TGGACCCCAA AAGGTCGGCG ATTGGTGAAA GAACCTTTTT GGTCGATGAT TTCATCCCGG ACCGCACCGA ATTCAGCCTG ACCAGCAAGG TGAAGGAGAT CGAGCCTTCA GCCTCTGTTC CCGTCAGCGT GGAGGGACGG TTTCTCTATG GCGCGCCAGC CGCGGGGCTC TCCCTGGAAG GGGATGTCAA TGTCAAGCCG ACCCGCGAGA ATGCGCTGTT CAAGGACTAT GTTTTCGGCC TGGCTGATGA GGAGATGGGT GACGGCAAGG AGCTTGCGCT GGAGGACTTG CCGGTTCTCG ACGAGGCGGG CAAGGCGACG TTCAATGTCA CTTTGGGTGA CCTCCCTTCC ACGACGCAAT GGCTTTCGGC CCGTATCGTC GTGCGTATGC GGGAGGGGAA CGGGCGCGCC ATTGAACGTG CGCTCGATCT GCCGGTGAAA GCCAAGGGGC CGATGATTGG CATCAAGCCG GAATTCAGCG GGGACCTTGG CGAAAATACA ATCGCCAATT TTCATGTGAT CGGAGTCTCC CCCGATGGCC ATAAACGGGC CATGCATGGG CTCACCTGGA AACTCGTGAG CGTGGAGCGC CGCTATCAAT GGTATCGCGA GGGCTCGGCC TGGAAATATG AACCCGTCAA CGCCACGAAA CAGGTCGCTG CCGGCATGCT TGATATTGGT GCTGACGGTG CCAGAATTTC CGTACCCGTC GTTTTCGGGC GCTATCGGCT GGAGATTGAG ACCAGCGAGG CCGAGGGGCC GAGTTCGAGC GTCGCTTTCG ATGCCGGATG GTTCGTCGAG GCGAGTTCCA CGGAAACCCC GGATGGTCTT GAGATCGCGC TCGATAAGCA GAGCTATAAG GTCGGCGAAA CCGCGACATT GAAAATATTG TCGCGTTACG CGGGTGAAGC TCTGGTGGCG GTCGGCGCGG AAAAGCTGAT CGCTGTTAAA ACCGCGAGCC TCGGCGACAA AGGTGGGGAG ATCGCGCTTC CCGTGACGGC GGATTGGGGG GCGGGGACCT ATATCACCGC GACTTTGTTC CGACCAGGCG ATGCACGCGA CAATCGCATG CCGATGCGCG CCATCGGTAT CAAATGGTTG CGGGTTGATC CCGGCGACCG CCAGTTGCTT GTCAAGCTAG ATCTTCCCGC CAAAATGCAG CCCCGGCAGC CCCTGGCTAT CGATCTCGAA GTGGCGGGCG CCGGGGTGAG GGAGGATGCC TATGTCACTG TCGCGGCTGT CGATGTCGGT ATTTTGAATC TGACACGCTA TGAGCCGCCG AATCCGGACG GCTGGTATTT TGGTCAGCGG CGGCTCGGGC TTGAGATTCG CGATCTTTAT GGGCGGCTGA TCGATGGCTC GCTCGGTGTG ACGGGCCGTT TGCGGACCGG TGGCGATGGT GGGCAAATGG CGCTCCAAGG TAGCCCGCCC ACGCAAAAGC TCGTGGCTTT CTTCTCAGGT CCAGTGAAAC TGGATGCCGG GGGGAAGGCC CATGTCGTTT TCGACATTCC CCAATTCAAC GGCACGGCGC GTGTCATGGC TGTCGCCTGG TCGAAATCTG GCGTTGGACA TGCGGTTGGC GATGTCATCA TCCGCGATCC CGTGGTTGTC ACGGCGAGCC TGCCAAGGTT CCTTGCGCCG GAAGACAAGG CCGAATTGCG GCTTGATATT GCCAATACCG ATGCACCCCC GGGTGACTAT CACATCAAGG CTGAGGGTAA TGCCGCGATT GGTTTCGAGA CAAGTCCCTT CTCACGCACA ATTCACCTTG CCGCAGGCGA AAAATCCAGT CTCGTGATCC CGATCCATGC CTTTCAACCG GGCAATGGAG AAGTATCTGT CACTGTGTCG AATGGGGTGA ATGACGCTCC CCAATTGTCC CTCGCGCAGA CCTTGGATGT GCCGGTTCGC CCGGCGATCC TTCCCATGAC GGCGCGACAT GTCATTTCTC TAATTCCGAA AAGCAGCCTG ACGATCGATC GTCAATTGCT CGCCGATTTC CAGCTTCAAG GGGCATCGGT CAGCATCAAT GTTTCGCGCG CGGCAGCCTT CGATGTCCCG GCCCTGCTGA TGGCGCTCGA CCGTTATCCC TATGGTTGCG CCGAGCAGAT CACCAGCCGA GCCCTACCGC TGCTTTATCT CAGTGAATTA GCAAAACAAT ATGGTCTTGC TGAGGAAGGG GATGTGCACC AACGGGTACA GGAGGGGATC TACAAAGTGC TTTCCTATCA GGGCTCGAGC GGCGGGTTCG GGCTCTGGGC GGCGGGTTCC GGCGATCTCT GGCTCGATTC CTATATTAGT GATTTTCTGA CCCGCGCCCG CGAGCAGAAA TTTGATGTGC CGGAGGAGGC CTTGGCGCAG GCGCTCGAAA ACCTCCAAAA CTCCCTGGCC TATGACGATA ATCTCAAGGA CAAAGGCAAT GAAATCGCTT ACGCGCTCTA TGTTCTGGCG CGCAATCGCC GGGCCGTGCT GAGCGATTTA CGCTATTATG CCGATACGAA ACTTGCCGAT TTTTCGACTC CGCTTGCCAA GGCGCATCTT GCCGCGGCTT TGGCCTTTTA TGGCGATGCG GAACGCTCAA AGGCCACCTT CCTGGATGCG CTGGGCCTGT CGCAACAGAT GCTTGTGTCC AAGGTGAGTC TGGCGCGTGC TGATTATGGC TCTCAACTCC GCGATGCGGC CGCCGTGCTG GCGCTGGCCT CGGAAAGTCG CCCGGTGCCG CCGATCGTTC CAGCCTTGGT CAAGATCGTC AGCCAGGAAT GGGAACAAAA ACCCGCAGCG AGCACACAGG AATTGACGTG GATGTTGCTC GCGGCCCGCG GACTCCAGGG GGCAGACAAG GATCTTGCGC TGACCGTCAA CGGGGTGCCG CGCGAGGGCG GATATCGGGC ACACCTCGAT GGCGATGCTT TGCTTGATCA TCCGGTGAAA CTGACCAATG AAACGGCAGT TCCAGTCACA GCCACCGTCA CGACGGTCGC GGCTCCGGTT CGACCCTTGC CAGCCGGCGG CAATGGATTC CTGATTGATC GCAAATATTA TACACTCGGC GGCAAGGAAA CCTCCGTGAC CAGGGTCAAG CAGAACGAGC GCTATGTCGT CGTGCTGCAT GTGAGCGAGA CCAATCAATG GCCACAGCGA ATTCTGATCA ATGATCTGCT GCCTGCTGGT TTCGAGATCG ACAATCCCAG TCTCGTCGAC AGCGCGCAGC TTTCGAATTT TGATTGGCTC GACGAAGTGG ATGCGGCGCA TACGGAATTT CGGAATGATC GTTTCATTGC CGCCTTTGAT CATTTAGGCA ATGATCACGA TGACATCACG CTCGCCTATA TCGTGCGCGC GGTGACGCCG GGCATTTATG ATCATCCGGC GGCGACGGTC GAGGATATGT ATCGGCCACA ATTTTCCGCG CAGACATCCA CGGGGCGGAT GGAGGTCGTG GCGGGGCAGA AATGA
|
Protein sequence | MSVSAIRVFV AGLLVTLVSL LPAIADAKRE AVLTQDVDYF GFDLRTEQNV TLDQCQASCL GNKACKAFTY NPKVKWCFLK SDFDRMNQAP GAIAGKIIDS ESREADLGAA PKLDFISNEL IRQARDFKAN LPRGRAPLGG GAPALIQQAR KDLTNGKSDA ALESLRLALA TAPDKPELWS EVARAGNELG KTTSLASQMA LVALNGYAVT RTASMRASAL VELAVALEKS ENYRAALNAY KASLALVNAK SVEAAYLDLK ARRGFRIIDH SIDKDTISPR ACVQFSEALV KAGVDYAPFL TLDGKAPKAF EAKDHEICVE GLAHGQHYKL GLRSGLPSSV GEVLEAPVSL DIYVRDRSPL VRFTGDNFVL PGSARRGIPI VSVNTDRADL KLYRIGDRGL AGLLTNTQFL TQLDRYSAQR IQDESGELVW QGAIDIQQDL NKEVVTSFPV DEALPKRQPG VYVLTAASPH TAKEDSDTQA TQWFVVSDLG ITTYAGTDAL SIFVRSLASA KPMADVDLQL LAKNNEILGT AKTDAEGRAT FSAGLMRGTG GLAPTIIMAR AGGSDFVFLD MTRAGFDLSD RGVAGRESPG AIDLLAWTER GIYRVGETVH ATALARDDRS VAIANLPLTF VFTRPDGVED RRFVRDGGTA GGYTLDLPLP DNALRGTWTM KVFVDPKRSA IGERTFLVDD FIPDRTEFSL TSKVKEIEPS ASVPVSVEGR FLYGAPAAGL SLEGDVNVKP TRENALFKDY VFGLADEEMG DGKELALEDL PVLDEAGKAT FNVTLGDLPS TTQWLSARIV VRMREGNGRA IERALDLPVK AKGPMIGIKP EFSGDLGENT IANFHVIGVS PDGHKRAMHG LTWKLVSVER RYQWYREGSA WKYEPVNATK QVAAGMLDIG ADGARISVPV VFGRYRLEIE TSEAEGPSSS VAFDAGWFVE ASSTETPDGL EIALDKQSYK VGETATLKIL SRYAGEALVA VGAEKLIAVK TASLGDKGGE IALPVTADWG AGTYITATLF RPGDARDNRM PMRAIGIKWL RVDPGDRQLL VKLDLPAKMQ PRQPLAIDLE VAGAGVREDA YVTVAAVDVG ILNLTRYEPP NPDGWYFGQR RLGLEIRDLY GRLIDGSLGV TGRLRTGGDG GQMALQGSPP TQKLVAFFSG PVKLDAGGKA HVVFDIPQFN GTARVMAVAW SKSGVGHAVG DVIIRDPVVV TASLPRFLAP EDKAELRLDI ANTDAPPGDY HIKAEGNAAI GFETSPFSRT IHLAAGEKSS LVIPIHAFQP GNGEVSVTVS NGVNDAPQLS LAQTLDVPVR PAILPMTARH VISLIPKSSL TIDRQLLADF QLQGASVSIN VSRAAAFDVP ALLMALDRYP YGCAEQITSR ALPLLYLSEL AKQYGLAEEG DVHQRVQEGI YKVLSYQGSS GGFGLWAAGS GDLWLDSYIS DFLTRAREQK FDVPEEALAQ ALENLQNSLA YDDNLKDKGN EIAYALYVLA RNRRAVLSDL RYYADTKLAD FSTPLAKAHL AAALAFYGDA ERSKATFLDA LGLSQQMLVS KVSLARADYG SQLRDAAAVL ALASESRPVP PIVPALVKIV SQEWEQKPAA STQELTWMLL AARGLQGADK DLALTVNGVP REGGYRAHLD GDALLDHPVK LTNETAVPVT ATVTTVAAPV RPLPAGGNGF LIDRKYYTLG GKETSVTRVK QNERYVVVLH VSETNQWPQR ILINDLLPAG FEIDNPSLVD SAQLSNFDWL DEVDAAHTEF RNDRFIAAFD HLGNDHDDIT LAYIVRAVTP GIYDHPAATV EDMYRPQFSA QTSTGRMEVV AGQK
|
| |