Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0370 |
Symbol | |
ID | 6198449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 425554 |
End bp | 427422 |
Gene Length | 1869 bp |
Protein Length | 622 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641704362 |
Product | pepF/M3 family oligoendopeptidase |
Protein accession | YP_001831513 |
Protein GI | 182677367 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1164] Oligoendopeptidase F |
TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTCTCA TTCATTCCTT GCTGTCCCGC AACTTCCTTG ATTTTCCACG AGATCCTGCC CAAGCGGGGC AGGGTGCGCC CGCCGTTGCG CTTGGGACCT TGCCGGAATG GAACCTCGCC GATCTCTATC CGGCGCCGGA TTCCCCCCTT TTCGCGCGCG ATCTCGCCCA TGCCGTGGCC GAGGCTAAGG CTTTTGCGGA GGCCTATAAG GGCCGGCTGG AAACATTGGC GATGGATCCT TCCAGCACGG GCCTGATCGA GGCCGTGCGC CGCTATGAGA CGGTTGAGGA ATTGCTTGGC CGGCTCATGT CCTATGCCGG TCTGCATTAT TACGGCGATA CGAGCGATGC GGCGCGCGCC AAATTCTATG GTGACACACA TGAGGAAATC ACCAAGGCCT CTTCCGATCT CCTGTTCTTC GAGCTCGAAT TGAACCGTCT TGACGACGCT TTGATCGAAA AGGCTCTCAA GGGCACGCCG CTTGAACATT ACCGGCCCTG GATCGAGGAT ATCCGCAAGG AAAAGCCACA TCAGCTCGAT GACAGACTCG AGCAATTATT TCTCGATAAA TCGGTGACCT GCCGCAGCGC CTGGAACCGT TTGTTCGATG AGACCATCTC CGCCTTGCGG TTCAAGGTTG ATGATCAGGA ACTGACCTTG GAACTGGCCC TGAACCTGAT GCAGGACGAG GACACGAAAG TCCGCGAAAA GGGTGCCAAC GCGATTGCCG AAACCTTGAA GGCCAATCTG CGGACCTTCA CGCTGATTTC GAATACACTC GCCAAGGATA AGGAAATTTC CGACCGCTGG CGCGGCTTCC AGGATATTGC CGATTCCCGT CATCTGTCGA ACCGGGTCGA GCGCGAGGTT GTGGATGCGC TGGTGGCGGC GGTTCATGCC GCCTATCCAC GTCTTTCGCA TCGCTATTAC AAGCTCAAGG CAAAATGGTT CGGACTGGAC CAGTTGAATC ATTGGGATCG CAACGCGCCT TTGCCCAATA TCGCCGCCAA GACCTATCCT TGGGCCGAGG CGCGCGACAC GGTGCTTGAT GCTTATGGCG CTTTCTCTGC CGATATGGCG GGTATTGCCA AACGCTTCTT CGACAATGGC TGGATCGACG CGCCGGCGCG TCCCGGCAAG GCTCCGGGTG CCTTCGCGCA TCCGACCGTG CCTTCCGCGC ATCCCTATGT CTTGCTGAAT TATCTTGGCA AGCCGCGTGA TGTCATGACA CTTGCGCATG AACTTGGTCA TGGTGTGCAT CAAGTGCTTG CCGGGCCGAA TGGGGCCTTG ATGGCGCCGA CGCCGTTGAC GCTCGCCGAA ACGGCTTCCG TCTTCGGCGA AATGCTGACC TTCCGCACTC TCCTGGCCCG CACGACCAAT GTGACCGAGC GCCGTGCCAT GCTTGCGGCC AAGGTCGAGG ATATGATCAA TACGGTCGTG CGGCAGATCG CTTTCTATAC ATTCGAGCGT AAACTGCATA CAGCCCGTCG TGAAGGAGAA CTAACCGCCG AACAGGTCTG CGAACTCTGG ATGAGTGTGC AGGCGGAAAG CCTTGGTCCC TCGATCAAGC TGGGGCCGGG TTATGAGACC TTCTGGGCCT ATATTCCGCA TTTCATTCAT TCGCCTTTCT ATGTCTATGC TTATGCCTTT GGCGATTGCC TGGTGAACTC TCTCTATGGC GTCTATGAAA AATCCCGCGA GGGTTTTGCC GAACGTTATC TCGCCATGTT GTCGGCGGGT GGCACCAAGC ATCATGCGGA ATTGCTCGCG CCCTTTGGAC TGGATGCGCG TGATCCCTCC TTCTGGCAGA TTGGCCTTTC GATGATCGAG GGTATGATCG GCGAACTGGA AAGCCTTGAG GGACAATAG
|
Protein sequence | MSLIHSLLSR NFLDFPRDPA QAGQGAPAVA LGTLPEWNLA DLYPAPDSPL FARDLAHAVA EAKAFAEAYK GRLETLAMDP SSTGLIEAVR RYETVEELLG RLMSYAGLHY YGDTSDAARA KFYGDTHEEI TKASSDLLFF ELELNRLDDA LIEKALKGTP LEHYRPWIED IRKEKPHQLD DRLEQLFLDK SVTCRSAWNR LFDETISALR FKVDDQELTL ELALNLMQDE DTKVREKGAN AIAETLKANL RTFTLISNTL AKDKEISDRW RGFQDIADSR HLSNRVEREV VDALVAAVHA AYPRLSHRYY KLKAKWFGLD QLNHWDRNAP LPNIAAKTYP WAEARDTVLD AYGAFSADMA GIAKRFFDNG WIDAPARPGK APGAFAHPTV PSAHPYVLLN YLGKPRDVMT LAHELGHGVH QVLAGPNGAL MAPTPLTLAE TASVFGEMLT FRTLLARTTN VTERRAMLAA KVEDMINTVV RQIAFYTFER KLHTARREGE LTAEQVCELW MSVQAESLGP SIKLGPGYET FWAYIPHFIH SPFYVYAYAF GDCLVNSLYG VYEKSREGFA ERYLAMLSAG GTKHHAELLA PFGLDARDPS FWQIGLSMIE GMIGELESLE GQ
|
| |