Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_0309 |
Symbol | |
ID | 6199088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 353812 |
End bp | 354711 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641704301 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001831452 |
Protein GI | 182677306 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.765891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.171881 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCTCT CAACCGCCCT CCGCGCCTTC GTTCGTATTG TCGAGAGGGG CTCGATGACC GCGGCGGCTA CGGACCTCGG CATTTCACAG CCTGCGGTTA GCAAGCTACT GCGCAATTTG GAGGAACATA CGGGCGCGAG GCTCATCGAA AGAAACCCGC GCGCCATGCG ACCGACCGCG CAGGGATTGG CGCTCTATGA GGCAGCAGGT AGCGCCCTAG CCGTTATCGA TTCAGCCATT GAAAGCGTCC GGAGCGACGT TGGCGCAATC CGTGGAAATC TCCGTTTGCA CGGGCCGACC TGCATCGGCG AGCGCCACTT ACACCAGATT GTCGCAGAAT TTCAGGATCG CTATGCGGCC GTCACCGTAG AGCTGATCCT TGAGAATCGA ACGGTTGATC TGATCCACGA AAATGTGGAT CTCGCCCTGC GTATGGGGAG ACCGGTCGAT CAAAACCTGA TTATGCGGCG TATCGGGCTC AGTAGAAGAA TCCTCGTCGC CTCACCAGAA TATCTCGAAC GCTGTGGACC AGTAAGAGTT TGCGAAGATT TGAGTGGCCA CGACATGGTG GTGACCAACG CCTCTCTTTC CGGTGGGGTA CTCCCTCTTC ACAAGGGGAA CCAGAAAATC GAAATCTCAG TTCGACCCAG GCTGATCACG AACAATGCAC AGGTTCTGGT CGGTGCGCTG AGAACAGGCA AAGGCATCGG GACCGCACAG GTTTTACTTG TAGCGGACGA ACTGAAAAAC GGCTCGCTCA TCCGAGTGCT TCCAGAATAT GAAATCGAGC CGACTGAGTT CTTTCTGGTC TATCCCTCTT CAAAATTCCT ACGGCCGACC GTTCGAGCAT TTGTTGATTT CGCAGCGCCG GCGTTGCAAC GCGTTGAGGG TATCTACTGA
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Protein sequence | MDLSTALRAF VRIVERGSMT AAATDLGISQ PAVSKLLRNL EEHTGARLIE RNPRAMRPTA QGLALYEAAG SALAVIDSAI ESVRSDVGAI RGNLRLHGPT CIGERHLHQI VAEFQDRYAA VTVELILENR TVDLIHENVD LALRMGRPVD QNLIMRRIGL SRRILVASPE YLERCGPVRV CEDLSGHDMV VTNASLSGGV LPLHKGNQKI EISVRPRLIT NNAQVLVGAL RTGKGIGTAQ VLLVADELKN GSLIRVLPEY EIEPTEFFLV YPSSKFLRPT VRAFVDFAAP ALQRVEGIY
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