| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_0060 |
|---|
| Symbol | |
|---|
| ID | 6200130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 62473 |
|---|
| End bp | 63378 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641704057 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_001831208 |
|---|
| Protein GI | 182677062 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0408] Coproporphyrinogen III oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.889116 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCAT CCATCCTTGA GGCCTGCAAG GCCAAGGCAA AGCCCTGGTT CGAATCCTTG
CAGGATGCGA TCATTGCCGC CTTCGAAAAA ATCGAAGCGG AAGCCCCAGG CCCCTTCCTT
GATGATCAGA CGCCGGCCGC TGGGCGTTTC ACCAAACAAC CCTGGACGCG CAAAAATCCC
GATGGCGAGG ATGGCGGCGG CGGTTTCATG GGGTTGCTCA AGGGTCGCGT CTTTGAAAAG
GCGGGCATCC ACGCCTCGAC CGTCTTCGGG CGTTTTGCGC CGGAATTCGC GAGCCAGATT
CCGGGTGCGG AGGCCGATCC CCGGTTTTGG GCGTCAGGTC TTTCGCTCAT CGCCCATCCG
GTCAATCCCA ATGTGCCGAC CGTGCATATG AATACGCGCT TCGTCGTGAC CAGCAAGGGT
TGGTTCGGCG GCGGAGCCGA TCTCACGCCC ATGCTCGATC GCCGCCGCAT GCAGAACGAC
AAGGATGCCA TCGACTTCCA CGCCGCCATG CGCGAAGCGT GCGACAAGCA CAAGGATGTC
GCCGATTATC CACGCCTCAA GGACTGGTGC GACGAATATT TCTATCTGAA ACATCGCAAT
GAGCCGCGCG GGATCGGCGG TGTCTTCTTC GATTATTTCG ACTGCCCGGA CGAGACGATT
TTCGACGCCA ATTTCGCCTT CGCCCAGGAG ATCGGTCGTG CCTTTCTCGC CATCTATCCT
GAAATCGTGC GGCGCAATTG GGCACAGCCC TGGACCGAGG CCGATCGCGA CGAACAATTG
GTCCGGCGCG GCCGTTATGT CGAATTCAAT CTGCTCTATG ATCGCGGGAC GATTTTCGGC
CTGAAAACCG GTGGCAATGT CGAGGCGATT CTTTCTTCGC TACCCCCTGT CGTCAAATGG
CGGTAA
|
|---|
| Protein sequence | MTPSILEACK AKAKPWFESL QDAIIAAFEK IEAEAPGPFL DDQTPAAGRF TKQPWTRKNP
DGEDGGGGFM GLLKGRVFEK AGIHASTVFG RFAPEFASQI PGAEADPRFW ASGLSLIAHP
VNPNVPTVHM NTRFVVTSKG WFGGGADLTP MLDRRRMQND KDAIDFHAAM REACDKHKDV
ADYPRLKDWC DEYFYLKHRN EPRGIGGVFF DYFDCPDETI FDANFAFAQE IGRAFLAIYP
EIVRRNWAQP WTEADRDEQL VRRGRYVEFN LLYDRGTIFG LKTGGNVEAI LSSLPPVVKW
R
|
|---|
| |