| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_29870 |
|---|
| Symbol | |
|---|
| ID | 8401531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 3379219 |
|---|
| End bp | 3380565 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644999019 |
|---|
| Product | carbohydrate-binding protein |
|---|
| Protein accession | YP_003156338 |
|---|
| Protein GI | 257070083 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCT CATCCCATCG CCCGCGCGGC CTCAGCCGGC GCTCCCTGTT CGGCCTCGGA
GCTGCGGGGG CGGGAGCCCT GGGCCTCGCC GCCTGCGGCG GCCCCGACGT CGGCGGCGAC
GGAGGCGGAG GCACCGAGGA TCTCGATCTC GACTTCGCGG ACGTCGACCC CGCACAGAAG
ATCGACTTCT GGACCAGCCA CCCCGGCGGC TCCCAGGAGG TCGAGGCGGA GCTCCTCGCC
GCCTTCACCG AGGAGACCGG CATCGAGGTC ACCCACGTGA CCGCGGGCTC CAACTACGAG
GAGATCGCCC AGCGCTTCCA GACGGCGCAG GCCGCGAACT CCGGGCTGCC CGCCGTCGTG
GTGCTCTCGG ACGTGTGGTG GTTCCGCTAC TACCTCAACG GGAACATCAT CCCGATCGAC
ACCCTCGTCG AGACGCTCGA GATCGACCTG TCCGACTACC GCGACTCGCT CGTGGAGGAC
TACCAGTACG AGGACAAGCA GTGGGCGCTG CCCTACGGCC GCTCCACGCC GCTGTTCTAC
TACAACAAGG ACCACTTCTC CGCCGCGGGC CTCCCGGACC GCGCCCCGGA GACCTGGGAG
GAGTTCGAGG AGTGGGCTCC GAAGCTCACC GAGGCCGAGA CCGCGTACAT GTACCCGGAC
CTCGCCGGCT ACGCGGGCTG GACGCTGCAG AACGTGCTGT GGGGCCAGGG CGCCGCCTGG
TCGGAGGAAT GGGAGATCAC CTGCAACTCC CCGGAGGCCG TCGAGGCCCT GCAGTGGGTC
CAGGACTCGG TGTTCGCCAA CGGCTGGGCG CAGGTCGCCT CGAGCGACTC GGCCGACACC
TTCGCCGCCG GGGTGTGCTC GGCGACCATC GCCTCGACCG GCTCGCTGGT CGGCGTGCTC
GACTCCGCCA CCTTCGACGT GGGCGTCGGC TTCCTGCCCG GCGGCAGCGT GGACGGGCCG
GTGTGCCCCA CCGGCGGGGC GGGCCTCGGG ATCCCCGCGG CGGTCAGCAA GGAGGAGCAG
CTGGCCGGTG CGATGCTCAT CGAGTTCATG GGCCGGCCCG AGAACACCGT CTCCTTCTCC
GCCGCGACCG GGTACATGCC GGTGCGCAAG AGCGCGGACC TCACCGAGCT CACCGAGAAG
ACCCCGGAGA TCCAGACCGC CGTGGACCAG CTCGACGTCA CCCGGCCGCA GGACTTCGCG
CGCGTGTTCC TGCCCGGCGC GGACCAGGAG ATGGCCGAGG CGATCGCCTC GATCGTCACC
ACGGAGGGCG ATGTCCAGGA GGCGATGGAC GGACTCAAGG AGACCCTCGA AGGGATCTTC
ACCAAGGAGA TCGAGCCGAA GCTCTGA
|
|---|
| Protein sequence | MTSSSHRPRG LSRRSLFGLG AAGAGALGLA ACGGPDVGGD GGGGTEDLDL DFADVDPAQK
IDFWTSHPGG SQEVEAELLA AFTEETGIEV THVTAGSNYE EIAQRFQTAQ AANSGLPAVV
VLSDVWWFRY YLNGNIIPID TLVETLEIDL SDYRDSLVED YQYEDKQWAL PYGRSTPLFY
YNKDHFSAAG LPDRAPETWE EFEEWAPKLT EAETAYMYPD LAGYAGWTLQ NVLWGQGAAW
SEEWEITCNS PEAVEALQWV QDSVFANGWA QVASSDSADT FAAGVCSATI ASTGSLVGVL
DSATFDVGVG FLPGGSVDGP VCPTGGAGLG IPAAVSKEEQ LAGAMLIEFM GRPENTVSFS
AATGYMPVRK SADLTELTEK TPEIQTAVDQ LDVTRPQDFA RVFLPGADQE MAEAIASIVT
TEGDVQEAMD GLKETLEGIF TKEIEPKL
|
|---|
| |