| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_28700 |
|---|
| Symbol | |
|---|
| ID | 8401414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 3231643 |
|---|
| End bp | 3233676 |
|---|
| Gene Length | 2034 bp |
|---|
| Protein Length | 677 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644998904 |
|---|
| Product | ABC-type multidrug transport system, ATPase and permease component |
|---|
| Protein accession | YP_003156224 |
|---|
| Protein GI | 257069969 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGA AGAAGACCTC CCGCAGGAGG GGCGACGCGC ACGAGAGCAC CGGGGCGGGA
GCCGAGCTCA CCGAATCCGA GATCCTCGAG ATGCAGGAGT CGATGTCGGG GGAGTGGGGC
GAGGCCGCGC CGCGCAAGGC GAAGGCGTTC TGGCCCTCAG CGCTGCGGCT CGCGGGCACC
TTCGGCGAGC ACAAGCTCGG ACTGTCCGTG GTGCTGCTGT TCGGCCTGAT CTCCACCGTG
CTCACCGTCT GGGCGCCCAC CATCCTCGGC GACGCCATGG ACGTCATCTT CGACGGCTTC
CTCACCGGAG ACGGCGTCGC CTTCGACGCG CTGGGCCGGC TGCTGCTGAT CGTGCTGGGC
ATGTACGTGA TCGCGGCGCT GTTCGACTGG CTGCAGGGAC GGCTGCTGAA CGACGTGGTG
ATGGAGATCG TCTACCGCCT GCGCGAGAGG ATCGAGGCGA AGGTCAACCG TCTGCCGCTG
TCCTACTTCG ACACCCGCCA GCGCGGTGAC CTGCTCTCCC GCACCACCAA CGACGTCGAC
AACGTCCAGA CCGCCCTCCA GCAGGCCTTC GCCTCCCTGG TCTACGCGGT CCTGACGATC
GTGGGCATCA CCGTCATGAT GTTCTGGCTG TCCTGGCAGC TGGCGCTCAT CGCCCTGATC
GCCCTGCCGA TCTCCGGCGT GGTCATCGGG CTCATCGGCG CGAAGTCGCA GAAGCTGTTC
ACCGCCCAGT GGCGCAACAC CGGGCGGCTG AACGGCCATG TCGAGGAGTC CTTCACCGGG
CACGACCTGG TGACCGTCTT CGACCGCCAG GACTCGATGC GCGAGCAGTT CGACGAGCGG
AACGAGGAGC TGTGGGAGGC CTCCTTCAAG GCCCAGTTCT ACTCCGGCAT GATCATGCCG
ATCATGCAGT GGGTGACCTA CCTCGGCTAC GTCGGCATCG CCGTGGTGGG CGGCCTGCGG
ATCGCCTCCG GGCAGATGTC GCTGGGACAG GTCACGGCCT TCATCCAGTA CTCGCGCGAG
TTCAACGCCC CGCTCGGCGA GGTGGCGGGG ATGGCGAACA TGCTGATCTC CGGCGTGGCC
TCCGCCGAGC GCATCTTCGA GCTGCTCGAC GCCGAGGAAC AGGAGGCCGA TGGCGAGATC
ACCGCCGGCG CGGGCGTCGA CGGCGAGGGG CGCGGCGAGC GCATCGAGCC CGCGGAGCTC
ACCGGCCCCA CCCGCGGCCG GATCGAGTTC GAGCACGTCG CCTTCTCCTA CACCCCGGAC
AAGCCGCTGA TCAGCGACCT GTCGCTCACC GCGGAACCGG GGCAGACCAT CGCGATCGTG
GGCCCCACCG GCGCCGGCAA GACCACCCTG GTGAACCTCA TCATGCGGTT CTACGAGATC
GACGCCGGGC AGATCCGCCT GGACGGCGTG GACATCCGCG CGCTCGACCG CGGCGCGGTG
CGCAGCCGCG TGGGCATGGT GCTGCAGGAT GCGGTGCTGT TCGGCGGCAC CATCCGCGAG
AACATCCGCT ACGGCCGCCT CGAGGCGAGC GACGAGGAGG TGCTCGCCGC CGCCAGGGCC
ACCTTCGTGG ACCGCTTCGT GCACACCCTG CCCGAGGGCT ACGACACCGT GATCGAGGAC
GAGGGCGCGA ACGTCTCCGC CGGCGAGCGG CAGCTGATCA CCATCGCCCG CGCTTTCCTC
GCCGATCCGG CGCTGCTCAT CCTCGACGAG GCCACGAGCT CCGTGGACAC CCGCACCGAG
GTGCTCGTGC AGGAGGCGAT GGCGGCGCTG CGCACCGACC GCACCAGCTT CGTGATCGCC
CACCGCCTCT CCACGATCCG CGACGCGGAC GTGATCCTGG TGATGGAGCA CGGCGACATC
GTCGAGCAGG GCTCGCACGA GCAGCTGCTC GAGGCCGAGG GCGCCTACCA CCGGCTGTAC
TGGTCGCAGT TCGCCTCCGG GGTGGATCCC GACGAGGACG AGGCCGTGCT CGAGCGCTCG
CTGAGCGTCA CCGGCGAGAT CACCGCCGTG GCGGGGGAGG GCGAGCAGGC GTAG
|
|---|
| Protein sequence | MSAKKTSRRR GDAHESTGAG AELTESEILE MQESMSGEWG EAAPRKAKAF WPSALRLAGT
FGEHKLGLSV VLLFGLISTV LTVWAPTILG DAMDVIFDGF LTGDGVAFDA LGRLLLIVLG
MYVIAALFDW LQGRLLNDVV MEIVYRLRER IEAKVNRLPL SYFDTRQRGD LLSRTTNDVD
NVQTALQQAF ASLVYAVLTI VGITVMMFWL SWQLALIALI ALPISGVVIG LIGAKSQKLF
TAQWRNTGRL NGHVEESFTG HDLVTVFDRQ DSMREQFDER NEELWEASFK AQFYSGMIMP
IMQWVTYLGY VGIAVVGGLR IASGQMSLGQ VTAFIQYSRE FNAPLGEVAG MANMLISGVA
SAERIFELLD AEEQEADGEI TAGAGVDGEG RGERIEPAEL TGPTRGRIEF EHVAFSYTPD
KPLISDLSLT AEPGQTIAIV GPTGAGKTTL VNLIMRFYEI DAGQIRLDGV DIRALDRGAV
RSRVGMVLQD AVLFGGTIRE NIRYGRLEAS DEEVLAAARA TFVDRFVHTL PEGYDTVIED
EGANVSAGER QLITIARAFL ADPALLILDE ATSSVDTRTE VLVQEAMAAL RTDRTSFVIA
HRLSTIRDAD VILVMEHGDI VEQGSHEQLL EAEGAYHRLY WSQFASGVDP DEDEAVLERS
LSVTGEITAV AGEGEQA
|
|---|
| |