Gene Bfae_28520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_28520 
Symbol 
ID8401396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp3212077 
End bp3213447 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content77% 
IMG OID644998887 
Productconserved hypothetical protein TIGR01777 
Protein accessionYP_003156207 
Protein GI257069952 
COG category[R] General function prediction only 
COG ID[COG1090] Predicted nucleoside-diphosphate sugar epimerase 
TIGRFAM ID[TIGR01777] conserved hypothetical protein TIGR01777 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.395924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGATCG AGACCGTCCA CCGGGTCGCC CATCCGCTGC CCGATGTCCT GGCCTGGTAC 
GACAGGCCCG GCGCGATCGT GCGCCTCACC CCGCCCGGCC TCGCCTCCGC GGAGGAGCCC
GCCGCCGGAG GGATGCACGC CGGCCGGCTG GTCGGTGCGC GCCTCGGCCC ACCGGTGCTG
CCCGACCTGC TGCGCCCCCA TTGGCTCCTG CGCCACGTCG AGCAGCCCCG CGAGGGCAGC
TTCGTGGACC AGCAGGTGCG CGGCCCGTGG CGCACCTGGC GGCACGAGCA CCATCTCGAG
GCCGACGGCT CCGGCACCGC GATCCGCGAC AGCCTCGAGG TCGAGCTGCC CCGCCGCCTC
GAGCGCCTCG CCCCGGTGGC CGAGTCCCAG GTGCGGCGCC TGCTCGCCTT CCGCGCCCGC
CAGCTGCACG ACGACCTCGC CTTCCACGCC CGCCACGCCC ACGTGCCCCG CCGCACCATC
GCGATCACCG GCTCCTCCGG TCTGATCGGC ACCCAGCTCG CCGCCCTGCT CGAGACCGGC
GGGCACACCG TGCGGAGGAT GGTGCGCGAG CCCGAGGTCG CCCCGGGCGA GATCTCCTGG
AACCCGAAGA CCGGCGAGCT GGACCCCGCG GACCTCGAGG GCGTCGACGT GGTGGTCAAC
CTCGCCGGCC GCTCGATCGC GACGCGATGG ACCGCGACCG CCCGGCGCGA GATCCGCGAC
TCCCGCCTCA ACGGCACCGT GCTCCTCTCC CGCACCCTGG CCGGGATGCG GGAGGGCCCG
GCCGCCCTCG TGCAGGCCTC CGCGATCGGG CTGTACGGGC CGCGCCGCCC CGGGGAGCTG
CTCACCGAGG CCGATCCGGG CGGGGAGGGC TTCCTCGCCG ACCTGGTCCG TGACTGGGAG
GGCGCGAGCC GCGCCGCTGC CGAGGCCGGG GTGCGAGTGG CGCAGGTGCG CACCGGGATG
GCGCTCAGCG ACGCCGGCGG CTCCCTGCTG CCGCAGCTGC CGCTGTTCCT CGCCGGCGTG
GGCGGCCGCC TCACCGACGG CGAGGCCATG ACCTCCTGGA TCTCGCTCGA CGACGTCGTG
CGCGCCTTCG CCCACGCCGC CCTCGACGCG GAGGTGACCG GGCCGCTCAA CGGCGTCGGC
CCGCAGCCCG TCACCGCGCG CGAGTTCGCC CGCACCCTGG GCGGCATCCT GCACCGGCCC
GCCCTGCTGC CGGTCCCTCC GGCCGGACCG CGACTGGTGC TCGGCGCCGC TGCGGCCGAC
GAGCTGATCC GCACCGACCA GAACGTCTCC TCCGCCCGGC TCGAGGCGAG CGGCTTCACC
CCCGTCCACA CCCGGCTCGA GGACGCCCTG CGGCACGTGC TGCGCCGCTG A
 
Protein sequence
MRIETVHRVA HPLPDVLAWY DRPGAIVRLT PPGLASAEEP AAGGMHAGRL VGARLGPPVL 
PDLLRPHWLL RHVEQPREGS FVDQQVRGPW RTWRHEHHLE ADGSGTAIRD SLEVELPRRL
ERLAPVAESQ VRRLLAFRAR QLHDDLAFHA RHAHVPRRTI AITGSSGLIG TQLAALLETG
GHTVRRMVRE PEVAPGEISW NPKTGELDPA DLEGVDVVVN LAGRSIATRW TATARREIRD
SRLNGTVLLS RTLAGMREGP AALVQASAIG LYGPRRPGEL LTEADPGGEG FLADLVRDWE
GASRAAAEAG VRVAQVRTGM ALSDAGGSLL PQLPLFLAGV GGRLTDGEAM TSWISLDDVV
RAFAHAALDA EVTGPLNGVG PQPVTAREFA RTLGGILHRP ALLPVPPAGP RLVLGAAAAD
ELIRTDQNVS SARLEASGFT PVHTRLEDAL RHVLRR