| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_27380 |
|---|
| Symbol | |
|---|
| ID | 8401282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 3062659 |
|---|
| End bp | 3064128 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644998777 |
|---|
| Product | succinate semialdehyde dehydrogenase |
|---|
| Protein accession | YP_003156097 |
|---|
| Protein GI | 257069842 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.723278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCACA AGGACGAGCA GGAGCTGCTG GACCGGGTCC CCGAGGAACT GTTCATCGAC
GGGCGCTGGC GCGCCGCGGA GGACGGGGAG ACCCTCGACG TGCACGACCC CGCCACCGGC
CAGGTGATCC GCACGATCGC CTCCGCCTCG AGCGGCGACG CGCAGAGCGC GATGGATGCG
GCGGCCGACG CCTTCCCCGA CTGGTCCCGC ACCCCGGCGC GCGAGCGCGG CGAGCTGCTG
CGGCGGGCGT TCGACCTGCT CACCGAGCGG GCCGAGGAGT TCGCGCTGCT GATGACCCTC
GAGATGGGCA AGCCGCTGGC CGAGTCGCGC GGCGAGGTGA CCTACGGCGG GGAGTTCCTG
CGCTGGTTCA GCGAGGAGGC GGCCCGCGTG CAGGGCCGGT ACGGGGCGGT CCCCGAGGGC
ACCGGGCGCA TGATCGTCTC CCAGCACCCC GTCGGCCCGT GCTACCTCAT CACCCCGTGG
AACTTCCCGC TGGCCATGGC GACCCGCAAG ATCGCCCCGG CGCTCGCGGC CGGCTGCACC
GTGGTGATCA AGCCCGCACA GCTCACGCCG CTGACCACCC TGCACTTCGT CCAGCTGCTG
GAGGAGGCGG GCCTGCCCCG CGGTGTGGTC AACGTGGTCA CCTCCCGCTC CTCGAGCACC
GTCTCGGCAC CGATCCTCGC CGATCCGCGG CTGCGGAAGC TCTCCTTCAC CGGCTCCACC
GAGGTCGGGA CGACGCTGCT GTCCCAGGCG GCGCCGGGCG TGCTGCGCAC CTCGATGGAG
CTGGGCGGCA ACGCCCCCTT CCTCGTGTTC GAGGATGCGG ATCTCGACGA GGCGGTCGAG
GGCGCGATCG CGGCGAAGTT CCGCAACATC GGCCAGGCCT GCACCGCCGC GAACCGCTTC
ATCGTGCACC GCTCGCTGGC GGAGGAGTTC GCGCGCCGCG TCACCGAGCG CGTCACGGGC
TTCGGCATGG GCCGCGGCAC CGAGGAGGGC GTCACCATCG GCCCGCTCAT CGACCAGGAC
GCCGTGGACA AGGCGCAGCG CCTGGTCTCC GATGCCCTCG AGCGGGGCGC GCACCTGACC
ACCGGCGGGT CTAGCGTGGA CGGGGAGGGC ACCTTCTTCG AGGCGACCGT GCTCTCCGAC
GTGCGCGAGG GCAGCGACCT GCTGCGCGAG GAGATCTTCG GCCCCGTGCT CGCGATCGTC
CCCTTCGACA CCGAGGAGGA GGCCGTCGCT CTCGCCAACG GCACCGAGTA CGGGCTGGTC
TCCTACGTGT ACACGCAGGA TCTCGCCCGC GGGCAGCGCA TGATCGAGCT GCTCGAATCC
GGGATGCTCG GCCTGAACGT CGGCGTGGTC TCCAACGCCG CGGCCCCCTT CGGCGGGTGG
AAGATGTCCG GCCTGGGCCG TGAGGGCGGC GCCGAGGGCC TCCACGAGTA CCTCGAGACG
AAGTACACCC TCACCCCGAA CCCCTTCTGA
|
|---|
| Protein sequence | MTHKDEQELL DRVPEELFID GRWRAAEDGE TLDVHDPATG QVIRTIASAS SGDAQSAMDA
AADAFPDWSR TPARERGELL RRAFDLLTER AEEFALLMTL EMGKPLAESR GEVTYGGEFL
RWFSEEAARV QGRYGAVPEG TGRMIVSQHP VGPCYLITPW NFPLAMATRK IAPALAAGCT
VVIKPAQLTP LTTLHFVQLL EEAGLPRGVV NVVTSRSSST VSAPILADPR LRKLSFTGST
EVGTTLLSQA APGVLRTSME LGGNAPFLVF EDADLDEAVE GAIAAKFRNI GQACTAANRF
IVHRSLAEEF ARRVTERVTG FGMGRGTEEG VTIGPLIDQD AVDKAQRLVS DALERGAHLT
TGGSSVDGEG TFFEATVLSD VREGSDLLRE EIFGPVLAIV PFDTEEEAVA LANGTEYGLV
SYVYTQDLAR GQRMIELLES GMLGLNVGVV SNAAAPFGGW KMSGLGREGG AEGLHEYLET
KYTLTPNPF
|
|---|
| |