Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_22960 |
Symbol | ispH |
ID | 8400842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | - |
Start bp | 2573344 |
End bp | 2574357 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644998348 |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_003155679 |
Protein GI | 257069424 |
COG category | [I] Lipid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0761] Penicillin tolerance protein |
TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.657852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGGCG TGAGCACCGG AACCGTCCTT CTTGCCGAGC CGCGCGGCTA CTGCGCCGGA GTCGATCGCG CCGTGGTCGC CGTCGAACGC GCCCTGGAGC ACTACGACGA GACGATCTAC GTCCGCCACG AGATCGTGCA CAACAAGTTC GTGGTCGACC GGCTCAAGGA GAAGGGCGCC GTGTTCGTCG AGGAGGTCGA CGAGATCCCC GAGGGGTCGC TGGTGATCTT CTCCGCCCAC GGCATCTCCC CGAAGGTCCG CGAGATGGCC GAGGAGCGGA ACCTGCGCAC CATCGACGCC ACCTGCCCGC TGGTCACCAA GGTCCACAAG GAGGCGGTGC GCTTCGCCCG CCAGGACTAC GACATCCTGC TGGTGGGCCA CGAAGGGCAC GAAGAGGTCG AGGGCACGGC GGGGGAGGCC CCCGAGCACG TGCAGATCGT GAACTCGCCG GACGACGTCC ACAAGGTCAC CGTGCGCGAC CCCGAGCGGG TCGTCTGGCT CTCGCAGACC ACCCTCAGCG TCGACGAGAC CATGGAGACC GTCGACAAGC TGCGCGAACG CTTCCCCACC CTGCAGTCGC CGCCCAGCGA CGACATCTGC TACGCCACCC AGAACCGGCA GGTCGCGATC AAGAAGATCG CTCCGGACGC GGATCTGGTG CTGGTGGTCG GCTCCCCGAA CTCCTCGAAC TCCGTGCGTC TGATGGAGGT CGCGAAGGAG GCCGGCGCGA AGGCGTCCCA CCGCATCGAC TCGGTCCATG AGCTGCAGGA GGAGTGGTTC GAGGGCGTCG AGACCGTGGG CGTGACCTCC GGCGCCTCGG TCCCGGACGT GCTGGTCCAG CAGCTGCTGA ACGTGCTGGC CGAGCGCGGC TACGGCGACG TGAAGCCGGT GCGCACCGCG ACCGAGGACC TCATGTTCTC CCTCCCGCGC GAGCTGCGCC AGGAGATGAA GAACCGCGGC GCGACCGACA GCCGGAAGAA GCCCACCGGC GAGAGCGCCA CCGCGGAGTC CTGA
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Protein sequence | MGGVSTGTVL LAEPRGYCAG VDRAVVAVER ALEHYDETIY VRHEIVHNKF VVDRLKEKGA VFVEEVDEIP EGSLVIFSAH GISPKVREMA EERNLRTIDA TCPLVTKVHK EAVRFARQDY DILLVGHEGH EEVEGTAGEA PEHVQIVNSP DDVHKVTVRD PERVVWLSQT TLSVDETMET VDKLRERFPT LQSPPSDDIC YATQNRQVAI KKIAPDADLV LVVGSPNSSN SVRLMEVAKE AGAKASHRID SVHELQEEWF EGVETVGVTS GASVPDVLVQ QLLNVLAERG YGDVKPVRTA TEDLMFSLPR ELRQEMKNRG ATDSRKKPTG ESATAES
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