Gene Bfae_22610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_22610 
Symbol 
ID8400807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp2542924 
End bp2544915 
Gene Length1992 bp 
Protein Length663 aa 
Translation table11 
GC content68% 
IMG OID644998317 
Productcholine/carnitine/betaine transport 
Protein accessionYP_003155648 
Protein GI257069393 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1292] Choline-glycine betaine transporter 
TIGRFAM ID[TIGR00842] choline/carnitine/betaine transport 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.524203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATG ACGAGCAGGA TGTCGGCCGA CGGAGTCCCG TGCGGCAGGA GCGGGCCGAC 
CGGCCCGCCG GAAACCCGCT GGCGAGCATC GACTATTCGC GGCCCCAGTA CCCCCATGAC
ATCCACCCGG CCCTGGTGCC GGGAATCGCC ATCGACGAGC AGCGCCGCCG CTACAGCGTG
GACAAGATCG TGTTCGGCGT GGCCGGTGCG CTCACCGTCG GTTTCGTGAT CTGGGGCGTC
ATCGACCCGG CGGGCGTCGG CGAGGTGGCC GATGCCGCCT ACGGCTGGAC GATGACGCAC
CTGGGCTGGC TGTTCAACGC CGTCGCCACC GTGGTGCTGG TCTCCCTGCT GATCCTGGCC
TTCTCCCGCT ACGGGAAGAT CCCGCTGGGC AAGGACGGGG AGAAGCCCGA GTTCTCCACC
TTCTCGTGGG TGGCGATGCT GTTCGCCGCC GGCCTCGGCA TCGGCGTGAT GTTCTGGGGC
CCCTCGGAGC CGCTCACCTA CTTCCTGACC CCGCCGCCGC GGACCAACGA TCCCGAATCG
GTCGAAGCGA TGCACATGGC GCTCGCCCAG ACCTACTACC ACTGGGGCTT CCACGCCTGG
GCCATGTACG CCCTGGTGGG AGGAGCCGTC GCCTACGCCG CCTACCGGCG CGGCCGCACC
CTGCTGATGT CCTCGATCTT CGAGCGGCTG TTCGGCAAGA AGCTCACCGA GGGCTGGGCC
GGCCAGCTGG TGGACATCTT CGCGATCATC GCGACGCTGT TCGGCACCGC CGCGGCCCTC
GGGATCGCCG TGCTGCAGAT CGGTGAGGGC GTGGTGATCG TCTCCGGCGC CTCCGAGCTG
ACCAACACCG TGATGATCCT GATCATCGGC GTGCTCTCGG CCGGTTTCGT GATCTCCGCC
GTCTCCGGCG TCTCGCGCGG CATCCGCTAC CTCTCGAACA TCAACATCGT GCTCACGATC
GGCTTCGCCG GGATGCTGTT CATCCTGGGG CCCACCCTGT TCCTGCTGAA CCTGCTGCCC
TCGGCCGTCA TGGAGTACGC CGCCTCGCTG TTCGAGATGA TGGCGCGCTC GGCCTCCTGG
GGCTCGGACA CGCTCGACTT CCAGTCCACC TGGACCGTGT ACTACTGGGC GTGGTGGATC
TCCTGGTCGC CCTTCGTGGG CATCTTCATC GCCCGCATCT CCCGCGGCCG GACCATCCGC
CAGTTCCTGC TCGGCGTCAT CGGCATCCCC TCCTCGCTGC TCTTCGTGGC CTACGGGATC
ATGGGCGGCA CCGCGATCTC GATGTACCGC GAGGGCAAGC TCGGCGAGCT GGACTCGGTG
AACCCGGCAC AGGTGCTGTT CTCGATGGCG GACAACCTCC CGCTCTCCGG CGCGCTGCCC
GTGCTGATCA TGGTCATCCT GGCGATCTTC TTCATCACCG CCGCGGACTC CGCCTCCGTG
GTGATGGGCA TCCTCACCAC GCGCGGCAGC CAGAACCCGC CCAAGCTGAT CGTCGTCTTC
TGGGGCCTGG TCATGGGCGG GATCGCCGTG GTCATGCTGC TGCTGGGCGA TGAGACCGCC
CTCGAGGGGC TGCAGTCGCT GGTGATCATC ACCGCCGTGC CCTTCGCCTT CGTGATGCTG
ATGGTCATCG TCGCCTGGGT GCGCGAGCTG CGCACCGACC CGCTCACCCT GCGCCAGCAG
TACGCGGAGG TCGTGGTGAG CAACGCCGTC GTGGACGGTG TGGACCGCTT CGACGACGAC
TTCAGCCTGC AGGTGGTCCG TGCCAAGCCC GGTGAGGGCG CGGGCGCGGA TGTCGACTCC
ACCCATGAGG ACTACACCGA GTGGTACCAG CGCACCGATG AGGAGGGCGA ACCGGTCGGG
TTCGACTTCG CGACCGGGGA ATGGGCCGAC GGGTGGACGC CGGAGACCGG GGAGATCGAG
ACGGTCGCGG CGGACGGCGA CGCCCCGTCC TCTCCCGAGG GCGGCTCGCC CGAGTCGCCG
CAGACGAGCT GA
 
Protein sequence
MSDDEQDVGR RSPVRQERAD RPAGNPLASI DYSRPQYPHD IHPALVPGIA IDEQRRRYSV 
DKIVFGVAGA LTVGFVIWGV IDPAGVGEVA DAAYGWTMTH LGWLFNAVAT VVLVSLLILA
FSRYGKIPLG KDGEKPEFST FSWVAMLFAA GLGIGVMFWG PSEPLTYFLT PPPRTNDPES
VEAMHMALAQ TYYHWGFHAW AMYALVGGAV AYAAYRRGRT LLMSSIFERL FGKKLTEGWA
GQLVDIFAII ATLFGTAAAL GIAVLQIGEG VVIVSGASEL TNTVMILIIG VLSAGFVISA
VSGVSRGIRY LSNINIVLTI GFAGMLFILG PTLFLLNLLP SAVMEYAASL FEMMARSASW
GSDTLDFQST WTVYYWAWWI SWSPFVGIFI ARISRGRTIR QFLLGVIGIP SSLLFVAYGI
MGGTAISMYR EGKLGELDSV NPAQVLFSMA DNLPLSGALP VLIMVILAIF FITAADSASV
VMGILTTRGS QNPPKLIVVF WGLVMGGIAV VMLLLGDETA LEGLQSLVII TAVPFAFVML
MVIVAWVREL RTDPLTLRQQ YAEVVVSNAV VDGVDRFDDD FSLQVVRAKP GEGAGADVDS
THEDYTEWYQ RTDEEGEPVG FDFATGEWAD GWTPETGEIE TVAADGDAPS SPEGGSPESP
QTS