| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_22520 |
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| Symbol | |
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| ID | 8400798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Brachybacterium faecium DSM 4810 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013172 |
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| Strand | + |
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| Start bp | 2529895 |
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| End bp | 2532141 |
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| Gene Length | 2247 bp |
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| Protein Length | 748 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644998310 |
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| Product | choline/carnitine/betaine transport |
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| Protein accession | YP_003155641 |
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| Protein GI | 257069386 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00223968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAGG CCGTCAGCAC TCCTCGCCCC GCAGACTCCC CCGGCACACG GAGGGACCCC
GGTGGGGAGG ACGGCGGATC GGTCCCGGCC TCCGGAGCGG CCAAGCGCTC CCACTCCCCC
GTCAACTGGC CGGTGTTCCT CGGCACCTCG GTCATCATCG TCGCGTTCGT GCTGTTCGCG
GGGATCTGGC CGGACACCGC CGAGACGGTG ATCTTCGGGT CCATGGACTG GGTGGCGACG
AACTTCGGCT GGTACTACGT CCTCACCGCC ACGCTCGTGG TCGTGTTCGT GCTGCTCGTC
GCGTTCTCCA AGGTGGGCGG GACGAAGATG GGCCCGGACC ATTCGCTGCC GAAGTACAAC
CTGTTCACCT GGGCGGCGAT GCTGTTCGCC GCCGGCATCG GCGTGGACCT GATGTTCTTC
GGGATCTCCG GCCCGGCCAC GAACTTCCTC ACCCCGCCGG ACGTCCCCGC GGGATCGGAG
GAGGCGGCGC GGATGGCGCC GATCTGGACG ATCTTCCACT ACGGGATCCC CGGCTGGGCG
ATGTACGCCC TCATGGGCAT GGCCTTCGGC CTGTTCGCCT ACCGCTACCA CCTGCCGCTG
TCGATCCGCT CCGCGCTCGC GCCGATCTTC GGCCGCCGCA TCCACGGCGC GGTCGGGCAC
GTCGCGGAGA TCGGCGCGAC GATCGGCACG ATCTTCGGCA TCTCGGTGTC CCTCGGCATC
GGCGTGGTGT TCCTGAACTT CGGCCTCTCC GCCCTGTTCG GCATCCCGAA CTCGATCGGG
GTGCAGGTCG CGCTCATGGC GCTGGCCGTG TTCATCACCG TGATGTCGAC CGTCTCCGGC
GTCGACAAGG GCATCCGCCG GCTCTCCGAG CTGAACGTGC TCATGGCGCT GGTGCTCATG
CTGTGGGTGC TGTTCTCCGG GCAGACCCAT CACCTGCTCA ACGCCCTGGT CCAGAACGTC
GGTGACTTCT TCTCCCGGTT CCCGGGGATG ATGATGAACA CCTTCGCCTA CAACGACGGG
ACCGCGGACT ACCCCGCCGA CCAGTGGATG GCGGATTGGA CGCTGTTCTT CTGGGCGTGG
TGGATCGCCT GGGCGCCCTT CGTGAGCCTG TTCCTGGCCC GCATCTCGCG CGGCCGCACC
CTGCGCCAGT TCGTGGTGGG CGTGCTGCTG ATCCCCTTCT CGTTCATCCT GCTGTGGGTG
TCGATCTTCG GCAACGCGGC GCTGAGCTTC TTCGGCGACG CCGACTTCCT CGACCTCGCC
GTGAACGAGC CCGAATCGGG CTTCTTCAAC CTGCTCGAGC AGTACCCGGG CGCGACCTTC
ACCGTCTCCC TCGCCCTGCT CACCGGCCTG TTCTTCTACG TCACCTCCGC CGATTCCGGC
TCGCTGGTGA TGGCGAACAT GACCTCGAAG GCCTCCACCG CGGAGTCCGA CGGCCCGCCC
TGGCTGCGGA TCGTGTGGGC CGTGATCACC GGCGCCCTGA CCCTGGTGAT GCTGTTCATC
GACGGGGTGT ACACGCTGCA GGCGGCGACC GTGATGGTGG GCCTGCCGCT GTCGGTGATG
GTCTACCTGA TGATGGTCAG CCTCTGGAAG GTGCTGCGCA TCGAGCTGAC CAGCCTCGAA
TCCCGCCAGG CGACCCTGCC CTCGCTGCTG ACCAGCCGGG TGCGCGAGGC CGAGGGCAGC
GACCGCGGCT CGTGGCGCCA GCGCCTCCAG CACCGCATGA CCTACGCGAC CGCCGAGCAG
GCGACGACCT TCATCGAGAC CGTCGCCACC CCCGCGGTCG AGGAGGTCGC GGCAGAGCTG
GAGGACCTCG GCGCCGATGT CGTCTGCCAG CGCGGCGCGC ACCCGGACAG CGGCATCCCC
TTCGTCGACC TCGTCGTCTC CTTCCCCGAT GCCGAGGACT TCAAGTACCA GACCTACCCG
GTGGCCTACT CGACCCCGAG CTTCGCGGCG AACCTCGCCG CGGTGCGCGA CACCTACTAC
CGCGTGGAGA TCTTCTCGGT GCTCGGTTCG CGGGGCCGCG ACATCATGGG CTCCTCGAAG
GCCCAGGTCA TCGCCGATGT GCTGGACTCC TACGACGCGC ACATCATGTA CTTGACCATG
AGCACGGAGA TCGGCACGGC GACGGGCACA GTCCCCGTCA CCGCACCGGA TACCTGGATC
GACACCGATC AGGTCGACAC CCCCGTAGAT TCGGCGTTCG AGGAGCATCC TCGCCGCACG
CCCGACACGA AGGAGCTTCA TGACTGA
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| Protein sequence | MAEAVSTPRP ADSPGTRRDP GGEDGGSVPA SGAAKRSHSP VNWPVFLGTS VIIVAFVLFA
GIWPDTAETV IFGSMDWVAT NFGWYYVLTA TLVVVFVLLV AFSKVGGTKM GPDHSLPKYN
LFTWAAMLFA AGIGVDLMFF GISGPATNFL TPPDVPAGSE EAARMAPIWT IFHYGIPGWA
MYALMGMAFG LFAYRYHLPL SIRSALAPIF GRRIHGAVGH VAEIGATIGT IFGISVSLGI
GVVFLNFGLS ALFGIPNSIG VQVALMALAV FITVMSTVSG VDKGIRRLSE LNVLMALVLM
LWVLFSGQTH HLLNALVQNV GDFFSRFPGM MMNTFAYNDG TADYPADQWM ADWTLFFWAW
WIAWAPFVSL FLARISRGRT LRQFVVGVLL IPFSFILLWV SIFGNAALSF FGDADFLDLA
VNEPESGFFN LLEQYPGATF TVSLALLTGL FFYVTSADSG SLVMANMTSK ASTAESDGPP
WLRIVWAVIT GALTLVMLFI DGVYTLQAAT VMVGLPLSVM VYLMMVSLWK VLRIELTSLE
SRQATLPSLL TSRVREAEGS DRGSWRQRLQ HRMTYATAEQ ATTFIETVAT PAVEEVAAEL
EDLGADVVCQ RGAHPDSGIP FVDLVVSFPD AEDFKYQTYP VAYSTPSFAA NLAAVRDTYY
RVEIFSVLGS RGRDIMGSSK AQVIADVLDS YDAHIMYLTM STEIGTATGT VPVTAPDTWI
DTDQVDTPVD SAFEEHPRRT PDTKELHD
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