Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_22320 |
Symbol | |
ID | 8400778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 2504710 |
End bp | 2506836 |
Gene Length | 2127 bp |
Protein Length | 708 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644998291 |
Product | PTS system IIA component/PTS system IIB component/PTS system IIC component |
Protein accession | YP_003155622 |
Protein GI | 257069367 |
COG category | [G] Carbohydrate transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component [TIGR00848] PTS system, fructose subfamily, IIA component [TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.215617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCTC CCCTGATCAC CTCCGAGCTG GTGCGTCTCG ACGTCGACCC GCCCGGCGAC AAGCACGCCG TGATCGGCCT GATGGCCGAT CTCATCGCCG CCACCGGCCG TGCCGAGCGC GACGGGCTCG AGGCCGGTCT GCTCAAGCGC GAGGAATCCT TCGCCACCGG CATGCCGGGC GGCTTCGCGA TCCCGCACTG CCGCACCGAG GCGGTGGACG AGGCGGCGCT GGGCCTGCTG CGGCTCGCGG AGCCGGTGGA CTTCGGCTCG GCCGACGGCC CCGCCGATCT GATCCTCGGG ATCGCCGCCC CGGCCGGCAC CGACGACCAG CACCTCCAGC TGCTCGCCCA GCTCTCCCGC GCCCTGATCC GCCCCGAGTT CCTCGCCGAC CTGCGCGCCG CCTCCACGCC GCAGCAGGCG GCGGACCTCG TGATGGGCGT GCTCGAACCG CAGACCGCGC AGACCGAACC GGCCCCGGCC CCCGGCGCAG CACCCGCGCC GGAGGACGCC GCCGATCCCG CGCAGCCCGA GAACGGCAGT CCCGTGACGC CGCCGAGCAC CGCCCCCGCG ACGGCCACCC CGGCGGCCGA CGGCGACGCC GGGCCCGGGG CGGACTCCGC TCCCGTGCTG CTGGCGATCA CCTCCTGCCC CACCGGCATC GCCCACACCT ACATGGCGGC CGAATCGCTC GAGAACGCCG CGCAGGAGAA GGGCGTCGAG CTGCACGTGG AGACCCAGGG CTCCGGCGGC ATCACCCCGT TCACCGACGC GCAGATCGCG TCGGCGAGCG CGCTCATCGT CGCCGCGGAC GTCACCATCT CCGGTCGGGA GCGCTTCGCC GGACTGCCGC TCGTGGAGCA CCCCGTCAAG CGCGCCATCT CGCACGGCCC GCAGATGATC GACGAGGCCG TCGCCGCGGT CTCCGACCCC TCGGCGCGGC GCGTGCCCGC CGGCGGCGAG CGCTCCGAGG GCGAGACCGC CGACGGCGAC TCCCGGCAGT CCTGGCCGCG CCGGATCCAG GGCGCGGTGA TGACGGGCGT GTCCTACATG ATCCCGTTCG TCGCGGCAGG CGGTCTGCTC ATGGCGCTGG GCTTCCTCAT CGCCGGGTTC GACGTCGCCT TCATCGCCCA GGACGTCGCC ACCGGCTTCT CCCTCTCCTC GCTGCCCGGG CACCAGGAGT ACGAGGGCGC CGCCGGGATG ATGCAGACCG AGCGCGCGGG CCTGGCCCTC TACCTCGGCG CGGTGCTGTT CACCCTCGGC GACCTCGGGA TGGGCTTCCT CGTCGCCGCC CTGTCCGGCT ACATCGCCTT CGGCCTGGCC GGCCGGCCCG GCATCGCCCC GGGCTTCATC GGCGGCGCGG TCTCCGTGGC CGTCGGCGCC GGCTTCCTCG GCGGCCTGAT CACCGGTCTG CTCGCCGGGC TCATCGCCCT GTGGTTCACC ACCCTCACCC CGCCGCGCTG GCTCGCCGGC CTGATGCCGG TGGTGATCAT CCCGCTGCTG ACCACGCTCG TCGTCGGCGG ACTGATGCTG CTGTTCCTCG GCCAGCCGCT CGCGGCGCTC ATGACCGCGC TGCAGGATGG GCTGACGAGC ATGTCCGGCT CCTCGGCGAT CCTGCTCGGC GTGATCATCG GGCTGATGAT GTGCTTCGAC CTCGGCGGGC CCGTGAACAA GGCCGCGTAC CTGTTCGCGA CCGCGGGCCT GTCCCAGGGC ACCGAGGCGG CCTTCCAGAT CATGGCCGCC GTGATGGCGG CGGGCATGGT GCCGCCGCTG GCGATGGCGC TGTCCACGGT GGTGCGCCGC CGGCTCTACT CCCCCGTCGA GCGGGAGAAC GGCACCACAG CGTGGCTGCT GGGCGCCGCG TTCATCTCCG AGGGCGCGAT CCCCTTCGCC GCGGCGGATC CGCTGCGGGT GATCCCCTCC TCGATGGCGG GCGGCGCCGT GGCCGGGGCG CTGGTGATGG CCTTCGGCGT CGGATCGCAG GCGCCGCACG GCGGCATCTT CGTCGCCTTC GCGATCTCCC CGGTGTGGGG CTTCGCGGTC GCGATCCTCG CCGGCACGCT GGTCTCCGCC GCGCTGGTGA CGATGCTGAA GGAGCTCGGC TCCCGCCGCG CCGGCGCGAC CGCCTGA
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Protein sequence | MSAPLITSEL VRLDVDPPGD KHAVIGLMAD LIAATGRAER DGLEAGLLKR EESFATGMPG GFAIPHCRTE AVDEAALGLL RLAEPVDFGS ADGPADLILG IAAPAGTDDQ HLQLLAQLSR ALIRPEFLAD LRAASTPQQA ADLVMGVLEP QTAQTEPAPA PGAAPAPEDA ADPAQPENGS PVTPPSTAPA TATPAADGDA GPGADSAPVL LAITSCPTGI AHTYMAAESL ENAAQEKGVE LHVETQGSGG ITPFTDAQIA SASALIVAAD VTISGRERFA GLPLVEHPVK RAISHGPQMI DEAVAAVSDP SARRVPAGGE RSEGETADGD SRQSWPRRIQ GAVMTGVSYM IPFVAAGGLL MALGFLIAGF DVAFIAQDVA TGFSLSSLPG HQEYEGAAGM MQTERAGLAL YLGAVLFTLG DLGMGFLVAA LSGYIAFGLA GRPGIAPGFI GGAVSVAVGA GFLGGLITGL LAGLIALWFT TLTPPRWLAG LMPVVIIPLL TTLVVGGLML LFLGQPLAAL MTALQDGLTS MSGSSAILLG VIIGLMMCFD LGGPVNKAAY LFATAGLSQG TEAAFQIMAA VMAAGMVPPL AMALSTVVRR RLYSPVEREN GTTAWLLGAA FISEGAIPFA AADPLRVIPS SMAGGAVAGA LVMAFGVGSQ APHGGIFVAF AISPVWGFAV AILAGTLVSA ALVTMLKELG SRRAGATA
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