Gene Bfae_21780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_21780 
Symbol 
ID8400724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand+ 
Start bp2449853 
End bp2450935 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content67% 
IMG OID644998238 
ProductABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
Protein accessionYP_003155569 
Protein GI257069314 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.392521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCCTC AGAGCCCCAC TCCCACCACC GGCTCACCGG TACCCACCGC GACGAAGGAA 
TCCGGCGCGC CCGTCTTCGA GGCCCGCGAT CTCTCGGTGC ATTTCCGCGT GGACAGTCCC 
GACGGCAAAG TCACTGTGCG CGCCCTGGAC GGCATCGACT TCACCCTCCG CGAGGGCGAG 
ATCGCCGCGC TCGTGGGAGA GTCCGGTTCC GGCAAGACCA CCCTGGCACG GGTCTTCTCG 
CTGATCCACG CACCGACCGC CGGTGACGTC CTGGTGAGCG GGGTACCGCT GAAGAAAGCC 
GCGAAGGACG AACGGCGCTA CTACCGCGAC GTGCAGCTCA TCTTCCAGGA TCCGTTCGCA 
TCGTTGAACG CGCTGAAGAA GATCCGGCAC ATCGTTGAAC GGCCGGTGCG GATCCACCGC 
ATCGCCACCG GTCGCAAGGC CGTCGCGCAC AAGGTGGCCG AGCTCCTGGA GCGGGTGAAC 
CTCACCCCTG CGTCTCGGTA CATCGACCGG TACCCGACGG ATCTCTCGGG CGGTCAGCGC 
CAGCGGGTGG CGATCGCGAA ATCTCTCGCC GTGAACCCCA AGGTGCTGCT CGCTGACGAA 
CCCACCTCGA TGCTCGACGC CTCGATCCGC CTCGAGGTCC TCAACCTGCT CGCCGACCTG 
CGCGAGAGCG CTGACCTCGC AGTCCTCTAC ATCACCCACG ACATCGCGAG CGCCCGCTAT 
GTCTCGGACC GGATCCACGT CATGTACGGG GGACGCATCA TCGAGTCCGG CCCGACCGAG 
CAGATCGTCA GCGATCCCGT GCATCCATAT ACGCGCTTGC TCATCGACGC CGCACCCGAC 
CCCGCCCATT ACAAGGGATC GGGCCATTCG GCGGCGCTGA CCACCTCGAA TGCTCCGCCG 
GTGGACAACT CTGTGGAAGT GGTCGGCTGC CGCTTCGCCA ACCGCTGTCC CCTGGCGCGT 
CCCGAATGCA CGAGTGCACC GATCCCCCGC TATCGGGGTC CCGACGGCAG AGACGTGCTC 
TGCGTCCTAG CCGATGAGCG TCCAGATTTC ACCCCCACCC ACGCCGCGCC CGCGGCACGT 
TGA
 
Protein sequence
MSPQSPTPTT GSPVPTATKE SGAPVFEARD LSVHFRVDSP DGKVTVRALD GIDFTLREGE 
IAALVGESGS GKTTLARVFS LIHAPTAGDV LVSGVPLKKA AKDERRYYRD VQLIFQDPFA 
SLNALKKIRH IVERPVRIHR IATGRKAVAH KVAELLERVN LTPASRYIDR YPTDLSGGQR 
QRVAIAKSLA VNPKVLLADE PTSMLDASIR LEVLNLLADL RESADLAVLY ITHDIASARY 
VSDRIHVMYG GRIIESGPTE QIVSDPVHPY TRLLIDAAPD PAHYKGSGHS AALTTSNAPP 
VDNSVEVVGC RFANRCPLAR PECTSAPIPR YRGPDGRDVL CVLADERPDF TPTHAAPAAR