Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_19470 |
Symbol | |
ID | 8400493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 2188110 |
End bp | 2189435 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644998010 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_003155352 |
Protein GI | 257069097 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.482258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCTCCG AGGTGCTGTG GAACGCCCCC GTCGCCGACC GTCCGGTCGA CGCCCTGGTG CGGGTCCCCG GTTCGAAGTC CCTGACCGCG CGGTGGATGT TCCTGGCCGC CGCCGCGGAT GAGCCGTCGG TGCTGCGCGG TGCGCTGGTC TCCCGCGACA CCCGGCTGAT GCGCGACGCG CTCGAGCGGC TCGGCGCCGT GCTCGAGGTG GAGGACGGGG CGCTGCACGT GACCCCGCTG CCCCCGCCGG CCGAGCACCC CGCCGAACCG GTCGAGATCC ACACCGGCCT GGCCGGCACC GTGATGCGCT TCGTGCCGAT GCTCGCGGCG CTCCATCACG GCGATGTGCG CTTCACCGGC GACGAGGCCG CCTTCCAGCG GCCGATGGAC GCCGTGGTCG ATGTGCTGCG CCAGCAGGGG GTCGAGGTGA CCGAGCACGG GGAGCCGGGC CGGCTGCCGC TGACCGTGCA CGGCACGGGC CGCCTCCCCG GCGGGCGGGT CGAGGTCGAC GCCTCGGCCT CCAGCCAGTT CATCTCCAAC CTGCTGCTGG TCGCCGCCCG TGCGGAGACG GACATCGAGC TGGTGCACGT GGGCGAGGTG CTCCCCTCCC TGCCGCACAT CGACATGACG GTGGAGACCC TGCGCCAGGC CGGGGTCGAG GCCACCCATC AGCTCGACGC CGAGGGCCGC CATGCGTGGT CCGTCCGTCA CGGCGCGATC CGCCCGCTCG AGGTGACGAT CGAGCCCGAT CTCTCCAACG CCGGGCCGTT CCTCGCCGCG GCGATGGCCA CCGGCGGCAC GATCGCCGTG GACGACTGGC CCGAGACCAC CACCCAGCCG GGGGATGCCT ACCGCGACCT GCTGACCCGG ATGGGCGGCG AGGTGTGGCG GGAGGGACGC ACCCTCTGCG TGCGCGGCAC CGGCACGCTC CGCGGGATCG ACGCCGACAT GTCCGCCATG GGCGAGCTGG TGCCGACCAT GTCGGCGCTG TGCGCCCTCG CCGAGACCCC CTCGCGCCTC ACCGGGGTCG CGCACCTGCG CGGCCACGAG ACCGACCGGC TCAAGGCGCT GGCCACCGAG CTCACCAAGA TCGGGGCCCG CACGAGCGAG CTCGAGGACG GTCTGGAGAT CCATCCGGGC GAGCTGCGAG GGGACGTCTT CGAGAGCTAC GAGGATCACC GCATGGCCAC CGCCGGCGCG ATCATCGGGC TGCGGGTGCC GGATCTGCGG GTGGTCGACA TCGGCACCAC GCAGAAGACC CTGCCGGACT TCGTGGGGAT GTGGCTGTCG ATGCTGCACC CGGAGCCGGC GGTGGACGAC GCGTGA
|
Protein sequence | MSSEVLWNAP VADRPVDALV RVPGSKSLTA RWMFLAAAAD EPSVLRGALV SRDTRLMRDA LERLGAVLEV EDGALHVTPL PPPAEHPAEP VEIHTGLAGT VMRFVPMLAA LHHGDVRFTG DEAAFQRPMD AVVDVLRQQG VEVTEHGEPG RLPLTVHGTG RLPGGRVEVD ASASSQFISN LLLVAARAET DIELVHVGEV LPSLPHIDMT VETLRQAGVE ATHQLDAEGR HAWSVRHGAI RPLEVTIEPD LSNAGPFLAA AMATGGTIAV DDWPETTTQP GDAYRDLLTR MGGEVWREGR TLCVRGTGTL RGIDADMSAM GELVPTMSAL CALAETPSRL TGVAHLRGHE TDRLKALATE LTKIGARTSE LEDGLEIHPG ELRGDVFESY EDHRMATAGA IIGLRVPDLR VVDIGTTQKT LPDFVGMWLS MLHPEPAVDD A
|
| |