Gene Bfae_15160 details

Gene Information

• Locus tag: Bfae_15160
• ID: 8400063
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Brachybacterium faecium DSM 4810
• Kingdom: Bacteria
• Replicon accession: NC_013172
• Strand: +
• Start bp: 1707639
• End bp: 1709591
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 644997582
• Product: Excinuclease ABC subunit C
• Protein accession: YP_003154935
• Protein GI: 257068680
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCTGATC CCGCGACCTA CCGTCCCGCC ACCGGAACCA TCCCCACCCG CCCGGGGGTG 
TACCGCTTCC GGGACGAGCA CGGCCGTGTC ATCTATGTGG GCAAGGCGAA GAACCTCCGC 
CAGCGCCTGG TGAACTACTT CCAGGACCTC TCCGTCCTGC ACGAGCGCAC CCGGCGCATG 
GTGACCACCG CCGCGAGCGT CGAATGGACG GTGGTGGGCA CCGAGGTCGA GGCGCTCACC 
CTCGAGTACA CCTGGATCAA GGAGTTCGAC CCGCGGTTCA ACGTCAAGTT CCGCGACGAC 
AAGTCCTACC CGTACCTGGT GCTGACGATG GGGGAGAAGG TGCCGCGGGT GCACATCACC 
CGTCGGCCGC GCGCCAAGGG GGACCGCACC TTCGGGCCCT ACCCGCAGGT GGGCGCGATC 
CGCGAGACCC TCGACCTGAT GCTGCGGGTC TTCCCGATCC GCTCCTGCAC CGCCGGGGTG 
TACCGCCGCG CCGAACGCTC CGGCCGCCCC TGCCTGCTCG GCTTCATCGG CAAGTGCGCG 
GCCCCATGCG TCGGCGACAT CTCCGAGGAG GAGCACCGCA GGCTCGCCGA GCAGTTCGCG 
GACTTCATGG CCGGCAACAC CTCGAAGTAC ACCCGGCGCA TCGAGCAGCG GATGAAGGCG 
GCCGCCGCAG CGATGGACTA CGAGACCGCC GCCGGGCTGC GCGACGACCT GCAGGCCCTC 
GAGAAGGTCA TGGAGAAGAA CTCGGTGGTG CTCTCCGACG CCACCGACGC GGACCTCATC 
GGTCTCGCGC AGGATGAGCT CGAGGCCTCC GTGCAGGTCT TCCACGTGCG CGGCGGGAGG 
ATCCGCGGCC AGCGCGGCTG GACCGCGGAG ATCCTCGACG ACTCCTCCGG CCCCGATCTC 
ATCGAGCGGG CGATGACCAC GCTGTACGCG GAGGGGGAGG CGCCCCGGGA GGTGCTCGTC 
CCGATCCTCC CCACGAACCG CGAGCAGGTC CTGCAGATGA TGGGCCGCAC CGTGGACCTG 
CGCGTCCCCC AGCGCGGCGA GAAGAAGGAC CTGCTGCGCA CCGTGGGGGA GAACGCCACC 
GAGGCGCTGC GCCTGCACCG GCTCAAGCGC ACCGGGGACC TCACCGCCCG CACCAAGGCG 
CTCGAGGACC TCGGCGAGGC GCTCGAGCTG GCCGAGCCGC CGCTGCGGAT CGAGTGCTTC 
GACATCTCCC ACTCCCACGG CACCAACGTC GTCGGCTCCC AGGTGGTCTT CGAGGACGGG 
CTGCCCAAGA AGAGCGAATA CCGCCGCTAC TCCGTCAGCG GCGCGGCCGC CCGGGACGAC 
ACCGCCTCGA TGTACGACGT CATCTCGCGG CGCCTGAAGC ACCACCTGGA CCCGCCGGAG 
CAGAGCGAGG AGGACAGGCG CCGGTTCGCC TACCCGCCCT CGCTGATCCT CGTCGACGGC 
GGGCCGCCGC AGGTCGCCGC CGCGCAGCGC GCCTTCGACG ATCTGGGCAT CACCGACATC 
GCCCTGGCCG GCATCGCCAA GCGTCTCGAG GAGATCTGGC TGCCCGGCGA CGACTACCCG 
GTCATCCTGC CGCGCACCAG CGAGGCGCTG TTCCTCGTGC AGCGGCTGCG GGACGAGGCG 
CACCGCTTCG CGATCACCTA CCACCGCTCC AAGCGCGGCC GCGCCATGCA GGCCAGCGCG 
CTGGACGGCA TCCCCGGCCT GGGCCCGGCC CGTCGGCGCG CCCTGCTGGA CCGCTTCGTG 
ACCGTCTCCG CGATCCGGGC CGCGAGCGAG GAGGAGCTGG TGGAGGTCGA CGGGATCGGC 
CCCGCGCTCG CCGCCCAGAT CGCGCTCGCG CTACGATCCG AGGTGGAGAG CGCAGCGGAG 
CCGGGGACGG ACGCGGGTGC GGACACCGTC ATCGAGGACG AGGCGCTCGG GGTGGCCGTG 
GACATGGCGA CCGGTGAGAT CATCGACCGC TGA 

 

Protein sequence

MADPATYRPA TGTIPTRPGV YRFRDEHGRV IYVGKAKNLR QRLVNYFQDL SVLHERTRRM 
VTTAASVEWT VVGTEVEALT LEYTWIKEFD PRFNVKFRDD KSYPYLVLTM GEKVPRVHIT 
RRPRAKGDRT FGPYPQVGAI RETLDLMLRV FPIRSCTAGV YRRAERSGRP CLLGFIGKCA 
APCVGDISEE EHRRLAEQFA DFMAGNTSKY TRRIEQRMKA AAAAMDYETA AGLRDDLQAL 
EKVMEKNSVV LSDATDADLI GLAQDELEAS VQVFHVRGGR IRGQRGWTAE ILDDSSGPDL 
IERAMTTLYA EGEAPREVLV PILPTNREQV LQMMGRTVDL RVPQRGEKKD LLRTVGENAT 
EALRLHRLKR TGDLTARTKA LEDLGEALEL AEPPLRIECF DISHSHGTNV VGSQVVFEDG 
LPKKSEYRRY SVSGAAARDD TASMYDVISR RLKHHLDPPE QSEEDRRRFA YPPSLILVDG 
GPPQVAAAQR AFDDLGITDI ALAGIAKRLE EIWLPGDDYP VILPRTSEAL FLVQRLRDEA 
HRFAITYHRS KRGRAMQASA LDGIPGLGPA RRRALLDRFV TVSAIRAASE EELVEVDGIG 
PALAAQIALA LRSEVESAAE PGTDAGADTV IEDEALGVAV DMATGEIIDR