| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_15150 |
|---|
| Symbol | |
|---|
| ID | 8400062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 1704755 |
|---|
| End bp | 1707631 |
|---|
| Gene Length | 2877 bp |
|---|
| Protein Length | 958 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644997581 |
|---|
| Product | Excinuclease ABC subunit A |
|---|
| Protein accession | YP_003154934 |
|---|
| Protein GI | 257068679 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0178] Excinuclease ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.096343 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGAAT CGCTGGTCGT CCGTGGTGCG CGCGAGCACA ACCTCAAGAA CATCGACATC
GACATCCCCC GCAACAAGCT GGTGGTGTTC TCCGGCCTGT CCGGCTCCGG GAAGAGCTCC
CTGGCCTTCG ACACCATCTT CGCCGAGGGG CAGCGCCGCT ACGTGGAGTC GCTGTCGAGC
TATGCCCGGC AGTTCCTGGG CCAGATGGAC AAGCCCTCGG TCGACCTCAT CGAAGGGCTG
TCCCCGGCGG TGTCGATCGA CCAGAAGTCC ACCAACCGCA ACCCGCGCTC GACCGTCGGC
ACGATCACCG AGGTCTACGA CTACCTGCGC CTGCTGTTCT CCCGCACCGG CGAGCAGCAC
TGCCCGGTCT GCGGCGAGCT CGTCGCCTCC TCCTCGGCGG AGCAGATCGT CGACACCCTG
CTCGCCCAGG AAGCGGGCAC CCGCTTCCAG CTGCTGGCCC CGGTGGTCCA GGGCCGCAAG
GGCGAGCACG CGGACCTGCT GAGCTCCCTG CGCTCGCAGG GCTACGCGCG CGCCCGGGTC
GACGGCACGA ACCGCCGTCT CGACGAGGAG ATCACCCTCG ACAAGAGGTA CAAGCACACC
ATCGAAGTGG TGGTGGACCG CCTCGCGGCG AAGCCGGATT CGCGCCGCCG CCTCACCGAC
TCCGTCGAGA CCGCTCTGCG CCTGGCCGAG GGCATCCTCG TGGTCGACTT CGTGGACCTG
CCCGAGGACG ATCCCGAGCG CATCCGCCGA TTCTCCGAGA AGCGCGCCTG CCCCAACGAC
CATCCGCTCG CGATCGACGA CATCGAGCCG CGCACCTTCT CCTTCAACGC CCCCTACGGC
GCCTGCCCCG AGTGCACCGG CCTCGGCCAG CGGCTCGAGG TCGATCCCGA GCTGGTGATC
CCCGATGAGG GGCTCTCCCT CACCGAGGGC GCGATCGCCC CGTGGACCAT GGGCTCGACC
GACCGCCACC TCGAGGTGAT GGCCGGCCTC GCCGAGGAGC TGAGCTTCTC GATGGACACG
CCGTGGCGGG CGCTGCCCCA GCGCGCCCGG GACGCGCTGC TGCACGGCAA GGACTTCAAG
GTCCACGTCA AGTACCGCAA CCGCTTCGGC CGCGAGCGCA CCTACTCCAC CGGCTTCGAG
GGCGTGATGC ACTTCCTCGA GCGCCGCCAC AGCGACACCG AGTCCGACTG GGCCAAGGAG
CGGTACGAAC AGTTCATGCG CGAGACCCCG TGCCCGGCCT GCAAGGGCGC CCGGCTGCGC
CCCGAGGTGC TGGCCGTGAC CGTGGGCGGC CGCTCGATCG CCGAGGTGTG CGAGATGTCG
ATCCGGGAGG CGCACGCCTT CCACGACAGC CTCGAGCTGG GGGAGCGGGA GGCGGCGATC
GCCGACGAGG TGCTGCGGGA GATCCGCTCC CGGCTCGGCT TCCTGCTCGA CGTCGGCCTG
GACTACCTCA CCCTCGCGCG CGCCGCCGGC ACCCTCTCCG GCGGCGAGGC CCAGCGCATC
CGGCTCGCCA CCCAGATCGG CTCCGGCCTG GTCGGCGTGC TGTACGTGCT CGACGAACCC
TCGATCGGCC TGCACCAGCG GGACAACGAG CGCCTCATCG GCACCCTCGA GCGGCTGCGC
GACCTCGGCA ACACCCTCAT CGTCGTCGAG CACGACGAGG ACACGCTCAA CGCCGCCGAC
TGGATCGTGG ACATCGGCCC GCTCGCCGGC GAGCACGGCG GGCGCGTGGT GCACTCCGGC
GACGTGGGCA GCCTGAAGCA GAACCCCGGC AGCCTCACCG GGCGCTACCT CTCCGGCGAG
CTGGAGATCC CGCTGCCCGC CGACCGCCGC CCGGTGGACC GCGAGCGGAT GCTCACGGTC
GTCGCCCCGC GGGCCAACAA CCTCGCCGGC CAGGACGTGG CCTTCCCGCT GGGGGTGCTC
ACGGCGATCA CCGGCGTCTC CGGGTCCGGG AAGTCCACCC TGGTCAACGA CATCCTGTAC
TCGGTGCTCG CCAAGGAGCT GAACCGCGCC CGGGTGGTGC CCGGCCGGCA CAAGCGCGTC
ACCGGCCTCG AGCACCTCGA CAAGGTGGTG CACGTGGACC AGTCGCCCAT CGGCCGCACC
CCCCGCTCGA ACCCCGCCAC CTACACCGGC GTGTGGGATC GGGTGCGCAC CCTGTTCGCC
CAGACCAACG AGGCGAAGAT CCGCGGATAC ACCGCGGGGC GCTTCTCCTT CAACGTCAAG
GGCGGGCGCT GCGAGGCCTG CTCCGGCGAC GGCACGCTGA AGATCGAGAT GAACTTCCTG
CCGGACGTCT ACGTCCAGTG CGAGGTGTGC AAGGGCCAGC GCTACAACCG CGAGACCCTC
GAGGTGAAGT TCAAGGACAA GAACGTCGCC GAGGTGCTGG GAATGCCCAT CGCGGAGGCG
CTCGAGTTCT TCGACGCCGT GCCCGCGATC CGCCGCCAGA TGCAGACCCT GGTCGACGTG
GGGCTGGGCT ACGTGAAGCT CGGCCAATCC GCGACCACCC TCTCCGGCGG CGAGGCGCAG
CGCGTCAAAC TCTCCTCCGA GCTGCACAAG CGCTCCAACG GCCGCACGAT CTACGTGCTG
GACGAGCCGA CCACCGGGCT GCACTTCGAG GACGTCCGCA AGCTGCTCGA GGTGCTCGGC
GGGCTCGTCG ACAAGGGGAA CACCGTGATC GTCATCGAGC ACAACCTCGA TGTCATCAAG
ACCGCCGACC ACGTCATCGA CCTCGGCCCC GAGGGCGGCG CGGGCGGCGG CCGCGTCGTC
GCCACCGGCA CCCCCGAGCA GGTCGCCGAG ACGCCCGGCT CCTACACCGG CCACTTCCTC
GCCCCGATGA TCGCCACCGG ACGTGCCGGC CGCACGCCGA GAAGCACCGA GCGCTGA
|
|---|
| Protein sequence | MSESLVVRGA REHNLKNIDI DIPRNKLVVF SGLSGSGKSS LAFDTIFAEG QRRYVESLSS
YARQFLGQMD KPSVDLIEGL SPAVSIDQKS TNRNPRSTVG TITEVYDYLR LLFSRTGEQH
CPVCGELVAS SSAEQIVDTL LAQEAGTRFQ LLAPVVQGRK GEHADLLSSL RSQGYARARV
DGTNRRLDEE ITLDKRYKHT IEVVVDRLAA KPDSRRRLTD SVETALRLAE GILVVDFVDL
PEDDPERIRR FSEKRACPND HPLAIDDIEP RTFSFNAPYG ACPECTGLGQ RLEVDPELVI
PDEGLSLTEG AIAPWTMGST DRHLEVMAGL AEELSFSMDT PWRALPQRAR DALLHGKDFK
VHVKYRNRFG RERTYSTGFE GVMHFLERRH SDTESDWAKE RYEQFMRETP CPACKGARLR
PEVLAVTVGG RSIAEVCEMS IREAHAFHDS LELGEREAAI ADEVLREIRS RLGFLLDVGL
DYLTLARAAG TLSGGEAQRI RLATQIGSGL VGVLYVLDEP SIGLHQRDNE RLIGTLERLR
DLGNTLIVVE HDEDTLNAAD WIVDIGPLAG EHGGRVVHSG DVGSLKQNPG SLTGRYLSGE
LEIPLPADRR PVDRERMLTV VAPRANNLAG QDVAFPLGVL TAITGVSGSG KSTLVNDILY
SVLAKELNRA RVVPGRHKRV TGLEHLDKVV HVDQSPIGRT PRSNPATYTG VWDRVRTLFA
QTNEAKIRGY TAGRFSFNVK GGRCEACSGD GTLKIEMNFL PDVYVQCEVC KGQRYNRETL
EVKFKDKNVA EVLGMPIAEA LEFFDAVPAI RRQMQTLVDV GLGYVKLGQS ATTLSGGEAQ
RVKLSSELHK RSNGRTIYVL DEPTTGLHFE DVRKLLEVLG GLVDKGNTVI VIEHNLDVIK
TADHVIDLGP EGGAGGGRVV ATGTPEQVAE TPGSYTGHFL APMIATGRAG RTPRSTER
|
|---|
| |