Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_15020 |
Symbol | |
ID | 8400049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 1692266 |
End bp | 1692880 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644997569 |
Product | shikimate kinase |
Protein accession | YP_003154922 |
Protein GI | 257068667 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0201152 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGGCC CCCTCGCCAT CCTCATCGGC CCGATGGCGG CGGGCAAGAC CAGCGTGGGG CGCGCCCTCG CCTCCCGGCT CGAGGTCCCC TTCGCGGATC TCGACGCCCT GATCGTCGAG GCCGACGGGC GGAGCATCCC GGAGATCTTC GCCGCCGACG GGGAGAACAC CTTCCGCGAG CTCGAGGCGG CCACGCTCGC CCGGGCGCTG CTCGAGCACC CCGGGATCCT CTCCCTCGGC GGCGGCGCTC CCATGCATCC CGCCTCGGCG GAGCGGCTGC GCGGCGGTCC CGTGATCTGG CTCGACGTCG ACGAAGCGAT CGCCGCGCGC CGCCTCGCCC ACGGCAGCGG CCGACCGCTG CTGCAGGGTG AGGACCCGAT GGGGCGCTGG CGCGAGCTGG CGCGCGAGCG CAGCCCGCGC TACCGCGAGC TGGCGGCGCT GCGGATCGAT GCCGGGCACG GCAGCCCCGC GCGCGTGGCA CGCGCGATCC TCGGCACGCT GCAGCTCGAG CCGCGCACGC GCCCCGACCA GGCAGCGCAT GCCCACCAGC GGACGCAGTC CGCCCGACCG GCGCAGCCCA CGCCGCTGAA CCGTCCCGAG AAGGAGACCT CATGA
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Protein sequence | MTGPLAILIG PMAAGKTSVG RALASRLEVP FADLDALIVE ADGRSIPEIF AADGENTFRE LEAATLARAL LEHPGILSLG GGAPMHPASA ERLRGGPVIW LDVDEAIAAR RLAHGSGRPL LQGEDPMGRW RELARERSPR YRELAALRID AGHGSPARVA RAILGTLQLE PRTRPDQAAH AHQRTQSARP AQPTPLNRPE KETS
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