Gene Bfae_13360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_13360 
Symbol 
ID8399883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand- 
Start bp1500957 
End bp1501604 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content68% 
IMG OID644997404 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003154768 
Protein GI257068513 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0417905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCAGA AGGAAGCCCC TCGCAGTCGG TCCACCCGCA TGTCCGGCAA GGAGCGGCGC 
GAGCAGCTGC TCGCCGTGGG GCGGCGGGTG TTCGCCGCCA AGGGCTTCGA CATGACCACC 
GTCGAGGAGA TCGCAGCCCG CGCGAAGGTC TCCAAGCCCG TCGTGTACGA GCACTTCGGC 
GGCAAGGAGG GCCTGTATGC CGTGGTGGTG GACCGCGAGG TCTCCACCCT GCTGGCGGCT 
CTGGAGCGCT CCCTCGCAGA TCAGCGCGCC CATCCGCGCG TGCTCATGGA GCGCGCGGCG 
CTGGCCTTCC TCTCCTACAT CGACGAGAAC GAGGACGGGT TCCGGATCCT GGTGCGCGAC 
TCCCCCGTCA GCCATTCGCT CGGCACCTTC TCCTCCCTGC TCACCGATGT GGCGCAGCGC 
GTCGAGGAGA TCCTCGCCAC GCAGCTCACG CTGCACCGCT ATCCGCCGAA GGACGCCGCG 
CTGTACGCCC AGATGCTGGT GGGGATGGTG GCGTACACGG GTCAGTGGTG GCTGGAGACC 
CGCATGCCGT CGAAGGAGAT CGTCGCGGCC CGGATGGTGA ACCTCTCTTG GTTCGGTCTC 
AGCGCGCTGC AGAAGACGCC CTCCCTGCGT GAGACCAGCA ACGACTGA
 
Protein sequence
MAQKEAPRSR STRMSGKERR EQLLAVGRRV FAAKGFDMTT VEEIAARAKV SKPVVYEHFG 
GKEGLYAVVV DREVSTLLAA LERSLADQRA HPRVLMERAA LAFLSYIDEN EDGFRILVRD 
SPVSHSLGTF SSLLTDVAQR VEEILATQLT LHRYPPKDAA LYAQMLVGMV AYTGQWWLET 
RMPSKEIVAA RMVNLSWFGL SALQKTPSLR ETSND