Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_11990 |
Symbol | |
ID | 8399746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | - |
Start bp | 1353325 |
End bp | 1355064 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644997268 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_003154633 |
Protein GI | 257068378 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.885522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACGCCG ACGACGAGAC CACTGCCCCT GCCACCACTC GGGATTCCGC CCCCGACATC AAACCGCGCA GCCGCCAGGT CACCGACGGC CTGGGCGCGA CGGTCTCGCG CGGCATGCTG CGCGCGGTGG GCATGGGTGA CGCTGACTGG GACAAGCCGC AGATCGGCAT CGCCAGCTCC TGGAACGAGA TCACCCCCTG CAACCTGTCG CTGGACCGCC TCGCGCAGGC GGCGAAGGAG GGGGTGCATT CCGGCGGCGG CTACCCGCTG CAGTTCGGCA CCATCTCCGT CTCCGACGGC ATCTCCATGG GGCACGACGG CATGCACTAC TCGCTCGTCT CCCGCGACCT GATCGCCGAC AGCGTCGAGA CGGTGATGAG CGCCGAGCGG CTCGACGGCT CGGTGCTGCT GGCCGGCTGC GACAAGTCCC TGCCCGGCAT GCTGATGGCC GCGGCCCGTC TGGACCTGGC CAGCGTGTTC GTCTATGCGG GCACGATCAT GCCGGGCCGG GTCTCCCTCT CCACCGGAGA GGAGAAGGAC GTGACGATCA TCGACGGCTT CGAGGCCGTC GGCGCCTGCG CGCGCGGGCT GATGAGCCGG GAGGACGTCG GCCGCATCGA GCGCTCGATC TGCCCGGGCG AGGGCGCCTG CGGCGGCTAC TACACGGCCA ACACCATGTC GACGGTCGCC GAGGCCATCG GCATGTCGAT CCCCGGCTCC GCCACTCCCC CCTCGGCCGA TCGCCGCCGC GACGCGGACG CACGGCGCGC GGGCGAGGCC GTGGTCGGCA TGCTCCGCCA GGGCATCACC AGCCACGACA TCATGAGCAA GGCCGCCTTC GAGAACGCGA TCGCGGTGGT CCAGGCCTTC GGCGGCTCGA CCAACGCGGT GCTGCACCTG CTCGCGATCG CGCACGAGGC GGAGGTGGAC CTCACCCTGG ACGACTTCGC CCGGATCGGC GCGAAGGTCC CCCACCTCGC CGATCTCAAG CCCTACGGCC GTTACGTGAT GAACGACGTC GACCACGTGG GCGGCATCCA GGTGGTGATG AAGACGCTGC TGGACGAGGG CCTGCTGGAC GGGGACTGCC TGACGGTCAC CGGGCGCACG ATCGCCGAGA ACCTCGAGGT GCTGCAGCCG CGGCCGGCCG ACGGCACGGT GCTGCGCCCG GCCTCGGCGC CGATCGCCCC CACCGGCGGC ATCACGATCC TGCACGGCTC CCTGGCGCCC GAGGGCGCGG TGGTGAAGTC CGCCGGCTTC GAGGAGGACG TCTTCGAGGG CACGGCGCGC GTGTTCGAGC GCGAGCAGCA CGCCCTGGAT GCCCTGAACG ACGGCACCAT CGACCACGGC GACGTGGTGG TGATCCGCTA CGAGGGCCCC AAGGGCGGGC CCGGCATGCG CGAGATGCTC GCGATCACCG GCGCGATCAA GGGCGCGGGC CTGGGCAAGG ACGTGCTGCT GATGACCGAC GGACGCTTCT CCGGCGGCAC CACCGGGCTG TGCGTCGGGC ACATCGCGCC CGAGGCCGTG GACGGCGGCC CGATCGCCGT CGTGCGGGAC GGGGACCGGA TCCGCCTGGA CGTGAGCACC GGGGCGCTCG ACCTGCTCGT GGATGAGGAG GAGCTGGCCG CCCGCTGGGA GGGCTGGGAG CCGCTGCCGC CGAAGTTCAC CAAGGGCGTG CTGGGCAAGT ACGTGCAGCT GGTGAAGTCC GCGTCCCGCG GAGCGATCCT CGGGGAGTGA
|
Protein sequence | MDADDETTAP ATTRDSAPDI KPRSRQVTDG LGATVSRGML RAVGMGDADW DKPQIGIASS WNEITPCNLS LDRLAQAAKE GVHSGGGYPL QFGTISVSDG ISMGHDGMHY SLVSRDLIAD SVETVMSAER LDGSVLLAGC DKSLPGMLMA AARLDLASVF VYAGTIMPGR VSLSTGEEKD VTIIDGFEAV GACARGLMSR EDVGRIERSI CPGEGACGGY YTANTMSTVA EAIGMSIPGS ATPPSADRRR DADARRAGEA VVGMLRQGIT SHDIMSKAAF ENAIAVVQAF GGSTNAVLHL LAIAHEAEVD LTLDDFARIG AKVPHLADLK PYGRYVMNDV DHVGGIQVVM KTLLDEGLLD GDCLTVTGRT IAENLEVLQP RPADGTVLRP ASAPIAPTGG ITILHGSLAP EGAVVKSAGF EEDVFEGTAR VFEREQHALD ALNDGTIDHG DVVVIRYEGP KGGPGMREML AITGAIKGAG LGKDVLLMTD GRFSGGTTGL CVGHIAPEAV DGGPIAVVRD GDRIRLDVST GALDLLVDEE ELAARWEGWE PLPPKFTKGV LGKYVQLVKS ASRGAILGE
|
| |