| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_11870 |
|---|
| Symbol | |
|---|
| ID | 8399734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | - |
|---|
| Start bp | 1343256 |
|---|
| End bp | 1344353 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644997257 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_003154622 |
|---|
| Protein GI | 257068367 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3415] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACC GTAATGCTCC ACTGACGGCT GTCGGAAGGC GGCGTGCGGT CGACCAGGTG
CTCGCGAGGG GTCGTCCGAT CGCGCACGTC GCTGCGGAGT TCCACATAGC TCGCGCCACG
CTCTCGAAGT GGGTCGGACG CTACCGGGCT GCCGGTGCAG CCGGGCTCGA GGAGCACTCC
AGCGCCCCCG CGCACCGCCC GTCCCGCTTG GAGGGGTGGG TGGTGGAGCT GATCGAGCAC
TGGCGGCGGA AACAGAAGTG GTCCGCCCGC CGGATCGCTC GTGAGCTCGC CGATGGCCAT
GGGGTCCACT GCTGCGTGCG GACCGTGACC CGGTGGCTGG ACCGCCTGGG CCTGAACCGG
ATCCGCGACA TCACTCCCGA CGGAGGGAAC CTGCGTCAGC CGGGCACGAT CACCGCCCGC
TATCCCGGGC ACATGATCCA CGTCGATGTG AAGAAGGTCG GGAAGATCCC CGACGGCGGC
GGCTGGAAGG TCCACGGACG CGACAGCGCC CTCGGGCGGG CGTCGAAGCG GGGGAAGGGC
CGGCGGGTTG GCTACACCTA CCTTCACTCG GCGATCGACG GGTTCTCGCG CCTGGCCTAC
ACCGAACCAC TCGAGGACGA GACAGCGGCG ACGACGATCG GATTCCTCCA TCGGGCGTTC
GCGTTTTTCG CCGCGCACGG GATCACCCGG ATCACGCGCC TGATCAGCGA CAACGGACCG
AACTACCGCT CAAACGCGTT CGCCAGGTCG ATTCGCGGGA AGGTCTCCCG CCATCAGCGG
ACCCGCCCCT ACACGCCCCG CCACAACGGG AAGGTCGAGC GGTTCCAGCG GATCACCGTC
GACGAGTTCC TCTACGCAGA GGTGTTCGAG TCCGAGCAGG AGCGCCGGAA CCGTCACGGC
GTCTGGCTGC ACCACTACAA CTACTGTGAG TGTTGGAGCG GCTGGTCTGG AACTGGCTGG
CAGGGTGGGC ACTGTGCCGC TCCCGCGCCG AGGTCGTGGC TCATACAACT ATTCGCCCCC
AACGGGTGCG TTTCGATGGA CATGTCCGAC TCCGGCGCAG GGCGGCTGGC GCTCGCCCGG
CCCACTCCGA TGGCTTGA
|
|---|
| Protein sequence | MTHRNAPLTA VGRRRAVDQV LARGRPIAHV AAEFHIARAT LSKWVGRYRA AGAAGLEEHS
SAPAHRPSRL EGWVVELIEH WRRKQKWSAR RIARELADGH GVHCCVRTVT RWLDRLGLNR
IRDITPDGGN LRQPGTITAR YPGHMIHVDV KKVGKIPDGG GWKVHGRDSA LGRASKRGKG
RRVGYTYLHS AIDGFSRLAY TEPLEDETAA TTIGFLHRAF AFFAAHGITR ITRLISDNGP
NYRSNAFARS IRGKVSRHQR TRPYTPRHNG KVERFQRITV DEFLYAEVFE SEQERRNRHG
VWLHHYNYCE CWSGWSGTGW QGGHCAAPAP RSWLIQLFAP NGCVSMDMSD SGAGRLALAR
PTPMA
|
|---|
| |