Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_10940 |
Symbol | |
ID | 8399642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 1227631 |
End bp | 1230729 |
Gene Length | 3099 bp |
Protein Length | 1032 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644997167 |
Product | alpha-mannosidase |
Protein accession | YP_003154532 |
Protein GI | 257068277 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0383] Alpha-mannosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00976973 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATGACA ACCGCCCCAC CAGCGAGGAC CGGGTCCGCC GGTTCCTCCG CGAGCAGCTG CCCGCCCGCC GCCACCTGGC CACCGCGCCG CTGACCATCG AGGCCTGGGA GGTGCCGGAC GAGCCGGTCC CCTTCGAGGA GGCCCGCCGC CAGACCTACA CCCCGGTCTC CGTCGGCGAC CGCTGGGGCC GCCCCTGGTC CACGCTCTGG CTGCACGTGA CCGGCCAGGT GCCCGTCTCC TGGACCACCG GCGAGGACCG CGACATCGAG CTCCAGCTCG ACCTGTCCTT CACCAACATG CCCGGCTTCC AGGCCGAGGC CCTCATCTGG ACCCCCGAGG GCGAGACCGT CAAGGCGATC AACCCCTACA ACCAGTACCT CACCCTCGAA GCCGGCCAGG AGGTCGACTT CTACCTCGAG TGCGCCGCGA ACCCCAACGT TCCCGGTGAC TGGACCTTCG CCCCCACCGC GCTGGGGGAC AAGGCCACCG CGGGCGAGGA TCCCATCTAC GACCTCACCC AGCTGCGGCT GGCCTGGCGC TCGAAGACCG TCTGGGAGCT CGAGCAGGAC ATCGTCGCGC TGAACGGCCT CATGCACACG CTGCCCGAGC AGTCGGCCCG CCGCTTCGAC ATCCTCCATG CCCTGGGCAA GGCGCTGGAT GCCGCGGACC CCGACGATCT GCACGGCACC GCCGCGGACG CCCGCGGCGA GCTGCGCGGC GTGCTCGACG CGCCCGCGAA CGCCTCGGCC CTCACCGTCG TCGCGACCGG TCACGCCCAC ATCGACTCCG CCTGGCTGTG GCCGGTGCGG GAGACCAAGC GCAAGTGCGC CCGGACCTTC TCCAACGTCT GCTGGCTGCT GGAGCACTAC CCCCAGCTGG TCTTCTCCTG CTCCTCCGCC CAGCAGTTCC AGTGGATCCG CGACGAGTAC CCCAGCCTGT TCCGCCGCAT CTCGGAGCAC GTGGCCGCGG GCCGCTTCGT GCCCGTGGGC GGCATGTGGG TCGAATCGGA CACGAACATG CCCAGCTCCG AGGCGATGGC GCGCCAGTTC ATCCACGGCA AGAAATTCTT CCTCGAGGAG TTCGACTTCG AGACCAAGGA GACCTGGCTG CCGGACTCCT TCGGCTACTC CGCCGCGCTG CCGCAGATCT GCGCGCTCGC CGGCAACGAT TCCTTCCTCA CCCAGAAGGT GTCCTGGAAC CAGTACTCGA CGTTCCCCCA CCACACCTTC CAGTGGGAGG GCATCGACGG GACCACCCAG TTCACCCACT TCCCGCCGAT CGACGCCTAC AACGGCCAGC TCACCGCCGC CGAGCTCGCG TACTTCGAGA AGAACTTCAA GGACAAGGGC GCCAGCCACA TCGGCCTGAC CCCCACCGGC TGGGGCGACG GCGGCGGCGG CCCCACCCGC GAGATGCTCG CCTCGCAGGA GCGCTTCGCT GATCTCGACG GCGCCCCGAA GGTCGAGTGG TCCACCTCGC AGGACTTCTT CGCCCGCGCC CGTGAGGAGT ACGTCGACGC GCCCGTCTGG AACGGGGAGC TCTACCTCGA GCTGCACCGC GGCACCTACT CCTCGCAGAT CCTCGGCAAG CAGGGCAACC GCCGCACCGA GGCGCTCCTG CACGACGTCG AGCTGTGGAG CGCCACGGCG GCCCGTCTCG TCGACGGCTT CGCCTACCCG TACGAGGAGA TCGACTCGCT GTGGGACAAG CTGCTGCTGC TGCAGTTCCA CGACATCCTG CCGGGCTCGT CGATCGCCTG GGTGCACCGC GAGACCGAGC AGTCCTACGA CTACATCACC GAGCGGGGCG AGGCCCTCGT GGCCGCGGCC CTCGAGGCGC TCGGCGACGA CTCGGGCAGC ACCGTCACCG CGAACTCCGC GGCCCGGGCG CGCCACGGCG TCGCGCCGCT GACGATCGCG GCGCCGGCCG GCCCGGGGGC GGCGCCCGCG GTGGCGCAGG CGGGGGGCGC GATCACCGTG ACCACCGACG CCCTGCACGT CGAGGTCGAC GAGCGCGGCC TGCTCACCTC GCTGCGTGCC GGGACCGACG GGCGCGAGGC GATCGCGCCG GGTGCGTCCG GAGCCCTGCT CCAGCTGCAC CGCGACGCCC CCAACGCCTG GGACTCCTGG GACATCGACG AATTCTACCG TCACGTGCAC CGGGACCTGG AGGCCGAGGG CGCGCCCGTG CTCTCCCACG ACGAGGACGG CACCGTCCGC ATCGCGGTCA CCTACCGCAC CCGTGAGGAC GGCGCCGCCG AGCGCCCCTT CGAGGGGATG CCCTCGGTGG GCACCGGGTC GCGCATCACC GTGACCTACT CGATCGCCCC GGGCGCCGAG GCGCTCGGCA TCGACCTGGA CGTGGACTGG CACGAGCGCA AGAAGGTGCT CAAGCTGGCG TTCCCGCTCG ATGTCCGCGC CGCCGCGATG AGCAGCGAGA TCCAGTTCGG GTACATCGAC CGTCCCATCC CCGTGAACAC CAACGAGGAC TTCGGCCGGT TCGAGACCTG CGCCCATCGC TGGGTCCGCG TGGCCGAGTC GGACTACGGG ATCGTGCTGG CCAACGACTC CTCCTACGGC CACGACGTGC GGCGCGTGCT GCGCGAGGAC GACGGCGGCA CCACCACGGT GGTCCGTGCG ACCGTGCTGC GGGCGGCGGA GTTCCCGGAC CCTCAGGCCG AGGAGGGGCA GTACTCCCTG CGCTACGCGA TCCGTCCCGA GGCGGACCAC GGGGACGCGG TGGATCTGGG CGAGGAGCTC AACCAGCCGC TGCGCCCGGT GCAGCGTGCG GAGGAGCTCG CGCCGGTTGC GCAGCTGGTC GGCGCCGACG GCGGGGCCGG CAGCGCCCGG ATCCAGACCG TCAAGCTCGC CGAGGACCGC TCGGGCGACC TCGTGGTGCG CCTGTACGAA TCCGAGGGCC GCCGCACCGC GACCTCGCTC GAGGTGCCCG GCGCCAGCTC GCTGACGGTG GTCGACCTCC TCGAGCGTCC GCTGACGGAG CAGTCCCCGC TGGGGCACCG CGCAGCGACC GTCGAGGACG ACGCGCTCGC CCTCACCCTC AAGCCCTTCG AGATCACGAC GGTCCGCGCG ACCTTCTGA
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Protein sequence | MHDNRPTSED RVRRFLREQL PARRHLATAP LTIEAWEVPD EPVPFEEARR QTYTPVSVGD RWGRPWSTLW LHVTGQVPVS WTTGEDRDIE LQLDLSFTNM PGFQAEALIW TPEGETVKAI NPYNQYLTLE AGQEVDFYLE CAANPNVPGD WTFAPTALGD KATAGEDPIY DLTQLRLAWR SKTVWELEQD IVALNGLMHT LPEQSARRFD ILHALGKALD AADPDDLHGT AADARGELRG VLDAPANASA LTVVATGHAH IDSAWLWPVR ETKRKCARTF SNVCWLLEHY PQLVFSCSSA QQFQWIRDEY PSLFRRISEH VAAGRFVPVG GMWVESDTNM PSSEAMARQF IHGKKFFLEE FDFETKETWL PDSFGYSAAL PQICALAGND SFLTQKVSWN QYSTFPHHTF QWEGIDGTTQ FTHFPPIDAY NGQLTAAELA YFEKNFKDKG ASHIGLTPTG WGDGGGGPTR EMLASQERFA DLDGAPKVEW STSQDFFARA REEYVDAPVW NGELYLELHR GTYSSQILGK QGNRRTEALL HDVELWSATA ARLVDGFAYP YEEIDSLWDK LLLLQFHDIL PGSSIAWVHR ETEQSYDYIT ERGEALVAAA LEALGDDSGS TVTANSAARA RHGVAPLTIA APAGPGAAPA VAQAGGAITV TTDALHVEVD ERGLLTSLRA GTDGREAIAP GASGALLQLH RDAPNAWDSW DIDEFYRHVH RDLEAEGAPV LSHDEDGTVR IAVTYRTRED GAAERPFEGM PSVGTGSRIT VTYSIAPGAE ALGIDLDVDW HERKKVLKLA FPLDVRAAAM SSEIQFGYID RPIPVNTNED FGRFETCAHR WVRVAESDYG IVLANDSSYG HDVRRVLRED DGGTTTVVRA TVLRAAEFPD PQAEEGQYSL RYAIRPEADH GDAVDLGEEL NQPLRPVQRA EELAPVAQLV GADGGAGSAR IQTVKLAEDR SGDLVVRLYE SEGRRTATSL EVPGASSLTV VDLLERPLTE QSPLGHRAAT VEDDALALTL KPFEITTVRA TF
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