Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_09950 |
Symbol | |
ID | 8399543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 1122621 |
End bp | 1124213 |
Gene Length | 1593 bp |
Protein Length | 530 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644997068 |
Product | signal recognition particle subunit FFH/SRP54 (srp54) |
Protein accession | YP_003154433 |
Protein GI | 257068178 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0229355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTCAACA ACCTCTCCGA TCGCATCACA GCGTCGCTGA AGGGCCTGCG CGGCCACGGC CGCCTCACCG AGGCGGACGT CGACAAGACG ATCCGCGAGA TCCGCCGTGC CCTGCTCGAC GCCGACGTCG CCGTCGCCGT GGTGCGGGAG TTCACCGGGC GGGTCCGCGA GCGCGCCCTG GGCGAGGAGG TTTCCAAGGC CCTCAACCCC GCCCAGCAGG TCGTCAAGAT CGTCAACGAC GAGCTGGTCG AGGTGCTCGG CGGCGCCACC GGCGAGCTGC ACTTCGCGAA GAACCCGCCC ACCGTCATCA TGCTGGCCGG CCTCCAGGGC GCGGGCAAGA CCACCCTGGC CGGCAAGCTC GCGAAGTGGA TGAAGGCCGA GGGGCACACC CCGCTCCTGG TCGCCGCGGA CCTGCAGCGC CCCAACGCCG TGACCCAGCT GCAGGTGGTC GGCGAGCGTG CCGGCGTGCC GGTGTTCGCG CCGGAGCCGG GCAACGGCGT GGGCGACCCG GTGCTGGTGG CGATGAACGG CGTCTCGACC GCCCAGTTCC AGCAGCATGA CGTGGTCATC GTCGACACCG CGGGCCGTCT CGGCATCGAC GAGGAGATGA TGGAGCAGGC GCGGAACATC CGCGACGCCG TCACCCCGCA CGAGACCCTG TTCGTCGTCG ACGCGATGAT CGGCCAGGAC GCCGCCCGCG TCGCCGAGGC CTTCCGCGAC GGCGTGGGCT TCACCGGCGT GGTGCTCTCG AAGCTCGACG GCGACGCCCG CGGCGGTGCC GCGCTGTCGA TCACCGGCGT CACCCAGCGC CCGATCCTCT TCGCCTCCAC CGGTGAGAGC CTCGACGAGT TCGAGCGCTT CCACCCGGAC CGCATGGCCA ACCGCATCCT CGACATGGGT GACGTGCTCA CCCTCATCGA GCAGGCGGAG AAGGCCTTCG ACCAGGAGGA GGCGGAGAAG GCCGCCGCGA AGCTGGCCTC CGGCGAGGAC TTCACCCTCG ACGACTTCCT CAACCAGATG CAGCAGCTCA AGAACATGGG CAGCATCAAG AAGATGCTCG GCATGCTGCC GAACATGGGC CAGTACCGCG AAGCGCTGGA CAACTTCGAC GAGGGCGAGA TCGGCAGGAT CGAGGCGATC ATCCGCTCGA TGACGCCCGA GGAGCGCAAC AACCCCAAGA TCATCAACGG CTCGCGCCGC AACCGCATCG CCCGCGGCTC CGGCACCACC GTGCAGCAGA TCAACCAGCT GCTCGAGCGG TTCAAGCAGG CCCAGCAGAT GATGAAGACG ATGGGGCGCG GCATGGCCGG CGGCGGCATG CCGGGCATGC CCGGCGGCCC CGGCATGGGG ATGGGCAAGA AGTCCCGCGG CAGGCAGGCC CCGCAGAAGA AGGTCAAGAA GTCCAAGTCG AAGAACCCCG CGAAGGCCGC ACGCGAGCAG GCCGAGGCCG CTCGCCGCGC CGCCGAGGGC GGTGCCGGCA CGGGCGGTTC CGCGTTCGGC GCGGGCGCCT CGCAGGGCGG CCAGCCGGAC GTGTCCGACT TCGATCCCAG CCAGCTCCCG CCGGAGATGC AGAAGCTCCT CGGCGGCAAG TGA
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Protein sequence | MFNNLSDRIT ASLKGLRGHG RLTEADVDKT IREIRRALLD ADVAVAVVRE FTGRVRERAL GEEVSKALNP AQQVVKIVND ELVEVLGGAT GELHFAKNPP TVIMLAGLQG AGKTTLAGKL AKWMKAEGHT PLLVAADLQR PNAVTQLQVV GERAGVPVFA PEPGNGVGDP VLVAMNGVST AQFQQHDVVI VDTAGRLGID EEMMEQARNI RDAVTPHETL FVVDAMIGQD AARVAEAFRD GVGFTGVVLS KLDGDARGGA ALSITGVTQR PILFASTGES LDEFERFHPD RMANRILDMG DVLTLIEQAE KAFDQEEAEK AAAKLASGED FTLDDFLNQM QQLKNMGSIK KMLGMLPNMG QYREALDNFD EGEIGRIEAI IRSMTPEERN NPKIINGSRR NRIARGSGTT VQQINQLLER FKQAQQMMKT MGRGMAGGGM PGMPGGPGMG MGKKSRGRQA PQKKVKKSKS KNPAKAAREQ AEAARRAAEG GAGTGGSAFG AGASQGGQPD VSDFDPSQLP PEMQKLLGGK
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