Gene Bfae_09220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_09220 
Symbol 
ID8399470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp1047523 
End bp1048038 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content75% 
IMG OID644996997 
Product2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_003154365 
Protein GI257068110 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCAC CGCTCGATGC ACCGCTGCCC CGGGTGGGCA TCGGTGTGGA CGTCCACGCC 
GTGGCCCCGG CCGGGACCGA CCGCGAGCTG TGGGTGGCGG GCCTGCTGTG GCCGGGCGAG
CCGGGACTGG CCGGGCATTC GGATGCCGAC GTCGCCTGCC ATGCCGCGTG CGACGCGCTG
TTCTCCGCCG CCGGGATCGG GGACCTGGGC TCCCATTTCG GGGTGGACCG CCCCGAATGG
GCCGGTGCCT CCGGGGCACG TCTGCTCGCG GAGGCCGCGC GTCGGGTGCG GGAGGCAGGT
TTCGAGATCG GCAACATCGC GGTCCAGGTG ATCGGCAACC GGCCCCGGCT CTCGAGCCGC
CGCGAGGAGG CCTGCGCCGC GATGAGCGAG GCGGCCGGCG CCCCGGTGAC CGTCTCGGGC
AGCACGACCG ATGCGCTGGG GCTGACCGGC CGCGGCGAGG GTGTGGCAGC GATGGCGACG
GCGCTGGTCG TCGCCGCGAA GGAGGGAACT GCATGA
 
Protein sequence
MTSPLDAPLP RVGIGVDVHA VAPAGTDREL WVAGLLWPGE PGLAGHSDAD VACHAACDAL 
FSAAGIGDLG SHFGVDRPEW AGASGARLLA EAARRVREAG FEIGNIAVQV IGNRPRLSSR
REEACAAMSE AAGAPVTVSG STTDALGLTG RGEGVAAMAT ALVVAAKEGT A