| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_07110 |
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| Symbol | |
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| ID | 8399259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Brachybacterium faecium DSM 4810 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013172 |
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| Strand | + |
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| Start bp | 809835 |
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| End bp | 812378 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644996787 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_003154158 |
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| Protein GI | 257067903 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR02776] DNA ligase D
[TIGR02777] DNA ligase D, 3'-phosphoesterase domain
[TIGR02778] DNA polymerase LigD, polymerase domain
[TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACGC GAGAGCAGCA GGTGGAGATC GACGGGCGCA GGCTGAAGCT GTCGAATCTC
GACAAGGTCC TCTACCCGCA GACCGGCACC ATCAAGGGCG AGGTGATCGA CTACTACCAC
CGCATCGCCC CGGTGTTGGT GCCGCAGGCG ACCCGCCGCC CCGCCACCCG CAAGCGCTGG
GTCGACGGCG TGGGAACCGC CCAGTCCCCG GGGAAGGTGT TCTTCCGCAA GGACCTCGAG
AGCCACGCCC CGCAGTGGGT CCCCCGCGCC GACATCCAGC ACAGCGACGG CACCTCGACC
TACCCGCTGG TGGACGAGCC GGCGGTCCTG GTCTGGCTCG CCCAGCTCGC CGCGCTCGAG
GTCCACACGC CCCAGTGGCG CTTCGACGAC GCGCTCGCCC CGGCCCCTCC CGACCGGTTG
GTCCTCGACC TGGACCCCGG CGAGGGGGCG GGGCTGCCGG AGTGCGCCCG GGTGGCCGCA
TGGTGCCGCG AGATCCTCAC GGACATGGGG CTCGAGAGCT ACCCGGTCAC CTCCGGCTCC
AAGGGCATCC ACCTCTATGC GCCCCTGGAC GGCAGCGCCG ACTCCGAGGA GGTGGACGCG
GTCGCCCACG AGCTCGCCCG TGCGCTGGAG ACCGACCACC CCGAGGAGGT CATCAGCACC
CAGACCCGTG CGAAGCGCGC CGGCAAGGTG CTCGTGGACT GGTCGCAGAA CAACGGCAGC
AAGACCACCG TGTGCCCGTA CTCGCTGCGC GGGCGCCTGC GCCCCACCGT CGCCGCCCCG
CGCACCTGGG AGGAGGTCGA GGATCCCGCG CTCGCGCAGC TCGAGCTCGA CGAGGTGCTC
GCCCGGGTCG AGGACGGCGT CGACCCCCTC GCGCCCCTCG GCCTCGCGGC TGAGGGCGAC
GCCGAGGAGA CCGGCCCGTC GTCGGCCGGA CGGGCACGCG ACCGCCTCGA GGCGTACCGC
GCGAAGCGGG ACCCGGAGCG CACGCCCGAG CCCGTGCCGG AGGCGGGCAT CGGCAGCGAC
GCCGCGCAGG AGGCCCTCGA GGACGAGGAG CCGATGTTCG TCATCCAGGA GCACCACGCC
TCGAGCCTGC ACTGGGACTT CCGCCTCCAG CATGCGGGGG TGCTCGTCTC CTGGGCGGTG
CCGAAGGGGC CGCCGCTCGA GGTCGACGTG AAGCGCCTGG CGGTGCAGAC CGAGGACCAC
CCCCTCGAGT ACGGCACCTT CGAGGGCACC ATCCCCGAGG ACGAGTACGG CGGCGGGGAC
GTCACCCTCT GGGACGCCGG CTCGATCGAG ATCGAGAAGT GGCGCGAGGA CCGCGAGGTG
ATCGTGGTGT GCCACGGCCG GCCCGACGGT GGGCTCGGCG GGGTGCCGCG CCGCTTCGTC
TTCCTCCACA CCGGCGGGAT GCGCGGAGGG CGCCGCACCG CCGCGGCGAA GGAGAAGGCG
GAGGCGAACT GGCTGCTGCA CCTCATGAAG GACCAGCCCG AGCCCGACGC GTCGCGCTCC
GACGACGCCG CCCCCGCCCC CGAGGACGAC GCCGCCGCCC CCGAGGACGC CCCCGTCGCC
GAGCTGGGCG AGCCGCTCGC CCCGATGCTC GCGACCCTCG GGCGGCGCGA GGACATCCGC
GACGAGGACG ACTGGGCCTA CGAGATGAAA TGGGACGGCG TGCGCGTGAT CGCGACGGTC
CGCGGCACGA CGGTGCGCCT GACCAGCCGC GGCGGCAAGG ACATGACCGC CGCGTTCCCC
GAGCTGGCCG AGCTCCTCGA CGCGGTGGAG CCTGCGCTGC GGGAGGCGGG GGAGACGGTG
CTCGACGGGG AGATCGTGGC CCTGGACCGC CACGACCGGC CCTCCTTCTC CCGCCTCCAG
CAGCGCCTGG GACTGACCCG GCAGCGGGAC GTGGACCGCG CCCGGCAGCA GGTCGAGGCG
CACGTGATGC TCTTCGACCT GCTCGTGCGG GGCGGGGACT CGCTGCTGCG AACGCCCTAC
CGCGAGCGGC GCGAGCAGCT GTTCGCCGCA GTGCACGCCA CCGAGCACGT CCAGCTCCCG
CACGCCGATC ACGGCGAGGT CGAGGAGGCG ATCGCCCTGT CGAAGCGGCT CCAGCTCGAG
GGCGTGATGG CGAAGAAGGA GAGCGGCGTC TACCAGCCGG GCAAGCGCAC CCGCACCTGG
ATCAAGCTCA AGAACGCCCG GCACCAGGAG GTGGTGGTGA TCGGCTGGCG GCACGGCAAG
GGGGAGAGGT CCGGATCGCT GGGGTCCCTG CTGCTCGCCG TCCCGGACTC CGAGGGCGAG
CTGCGCTACG CAGGCCGCGT CGGCACCGGG TTCACCGACC GCGACCTCGA GGAGATCGCC
GCCCGGCTCC GCTCCCGGTC CCGGAAGACC CCGCCCGTCG ATGACGTCCC CGCGGCGGAC
CGGCGCGATG CCGAATGGGT GCGCGCGGAC CTGGTGGGGG AGGTGCAGCA CACCGAGCGC
ACGGCCGACG GGCGGCTGCG TCACCCGGTG TGGCGCGGAT GGCGGCCCGA GAAGAACGTC
GCTGACCTGC AGTGGGAGTC CTGA
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| Protein sequence | MATREQQVEI DGRRLKLSNL DKVLYPQTGT IKGEVIDYYH RIAPVLVPQA TRRPATRKRW
VDGVGTAQSP GKVFFRKDLE SHAPQWVPRA DIQHSDGTST YPLVDEPAVL VWLAQLAALE
VHTPQWRFDD ALAPAPPDRL VLDLDPGEGA GLPECARVAA WCREILTDMG LESYPVTSGS
KGIHLYAPLD GSADSEEVDA VAHELARALE TDHPEEVIST QTRAKRAGKV LVDWSQNNGS
KTTVCPYSLR GRLRPTVAAP RTWEEVEDPA LAQLELDEVL ARVEDGVDPL APLGLAAEGD
AEETGPSSAG RARDRLEAYR AKRDPERTPE PVPEAGIGSD AAQEALEDEE PMFVIQEHHA
SSLHWDFRLQ HAGVLVSWAV PKGPPLEVDV KRLAVQTEDH PLEYGTFEGT IPEDEYGGGD
VTLWDAGSIE IEKWREDREV IVVCHGRPDG GLGGVPRRFV FLHTGGMRGG RRTAAAKEKA
EANWLLHLMK DQPEPDASRS DDAAPAPEDD AAAPEDAPVA ELGEPLAPML ATLGRREDIR
DEDDWAYEMK WDGVRVIATV RGTTVRLTSR GGKDMTAAFP ELAELLDAVE PALREAGETV
LDGEIVALDR HDRPSFSRLQ QRLGLTRQRD VDRARQQVEA HVMLFDLLVR GGDSLLRTPY
RERREQLFAA VHATEHVQLP HADHGEVEEA IALSKRLQLE GVMAKKESGV YQPGKRTRTW
IKLKNARHQE VVVIGWRHGK GERSGSLGSL LLAVPDSEGE LRYAGRVGTG FTDRDLEEIA
ARLRSRSRKT PPVDDVPAAD RRDAEWVRAD LVGEVQHTER TADGRLRHPV WRGWRPEKNV
ADLQWES
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