Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_05560 |
Symbol | |
ID | 8399104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 645519 |
End bp | 646532 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644996640 |
Product | ABC-type dipeptide/oligopeptide/nickel transport system, permease component |
Protein accession | YP_003154012 |
Protein GI | 257067757 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0332044 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTACG TCCTGCAACG CACCGGGGGC GCGCTCCTGG TGCTGGTCCT CGCCTTCACC GCCGCGTACA TCCTGCTCAC GGCCCTGCCC GGCGATGCCG TGCTGGCCCG CTACGGCAAC CCCGATCTGG GGCTGACCCC GGAGCAGCTC GCCGAGATCC GCGCCGCCTT CGGCGCGGAC CGCCCCGCGG TGCTGCAGTA CCTCGACACG GTGGTCTCCT TCCTGCAGGG GGATCTGGGG TATTCGGTCC AGAGCGGCGC GGCGGTCTCC GCCCTGCTCG CCGAGGCGCT GCCCTCCACG CTCACCCTCG CCGCGCTGGG CCTGCTGCTC GCCGTGGTGC TCGCGGTGAC CATCGCGTTC ACCGCCACCC ACGGCAGCCT GCGCGGCACC CGGGCCACCA CCTGGCTGCG CGGCGCGCTG CGGGGCCTGC CCCCGCTGAT GGTGTCCCTG CCGGTGTTCT GGATCGGGAT CATGCTCATC CAGGTGTTCT CGTTCCGGCT GGGCCTGGTC CCGGTGCTGA ACGCGAGCCC CGCCCAGTCG CTGATCCTGC CGGTCGCGAC GCTCGCCCTG CCGATCGCGG CGCCGCTCGC GCAGGTGCTG ATCCGTTCGA TCGACGAGGT CTCCGCCCAG CCCTTCGTGG CGGTGGCCCG CGCCCGCGGC GCCTCCACCT GGTGGCTGCT GTGGCGCACG GTGGCCCGCA ACGCCCTGCT GCCCACCCTG ACGATGGCCG GGCTGCTGTT CGGCGAGCTC GTGGGCGGCG CCGTGGTCAC CGAGGCGGTG TTCGGGAGGA TGGGCGTCGG CCAGCTCACC GCCCAGGCCG TCGCCGCGCG CGACACCCCC GTGCTGATGG CCGTGGTGGT GCTGTCCACC ATCGTGTTCG TGCTGGTGAA CCTCATCGTG GACCTGCTGT ACCCGGTGCT CGACGCCCGG CTGCGCCGCA CCGACGCCGC CCCCGCGGCA TCCGGAGCCG GCACGTCGGG CTCCACCACC GAGCAGAGCG AGGTGACCGC GTGA
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Protein sequence | MRYVLQRTGG ALLVLVLAFT AAYILLTALP GDAVLARYGN PDLGLTPEQL AEIRAAFGAD RPAVLQYLDT VVSFLQGDLG YSVQSGAAVS ALLAEALPST LTLAALGLLL AVVLAVTIAF TATHGSLRGT RATTWLRGAL RGLPPLMVSL PVFWIGIMLI QVFSFRLGLV PVLNASPAQS LILPVATLAL PIAAPLAQVL IRSIDEVSAQ PFVAVARARG ASTWWLLWRT VARNALLPTL TMAGLLFGEL VGGAVVTEAV FGRMGVGQLT AQAVAARDTP VLMAVVVLST IVFVLVNLIV DLLYPVLDAR LRRTDAAPAA SGAGTSGSTT EQSEVTA
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