Gene Bfae_05120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_05120 
Symbol 
ID8399060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp586953 
End bp588377 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content71% 
IMG OID644996599 
Productalpha-L-fucosidase 
Protein accessionYP_003153971 
Protein GI257067716 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3669] Alpha-L-fucosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAGCC CAGCCACTGC CCCCGCTGAT GACGTCCGCT TCGGCCCGCT CGTCGGCCGC 
CGCGACGACG AGGCCATGCG GGCGTTCCGC TCCTACGGGC TCGGCCAGTT CATCCACTGG
GGCCTGTACT CCATGCTCGG CAACGAGTTC GAGGGGCGCA GCGCGCGCGG CCACGCCGCC
GCCTCCGAGT GGATCCGGCA GTGGAACCCG CGCACCGCGC CGGAGGGCTG GCCCCGCCAG
TACGACGCGC TGCACCGCAG CTTCGACCCC TCGGACTTCG ATGCCCGCCG CTGGGCCCGT
GAGGCCCGGC AGATGGGGGC CCGGTACGTC ATCTTCACCA CGAAGCATCA CGACGGGTTC
GCGATGTGGC CCTCCGCCCA CTCCGAGTAC ACGATCGCCG CCACCCCGTA CGAGGGGGAC
ATCGTGGGCG AGATCGTCGA GGCGTACGCG GCCGAGGGGA TCGACGTGTT CCTCTACTAC
TCGGTGCTCG AGTGGAACCA CCCCGACTAC ATGGCCCACG CGCCCCGCAC CGCCCAGGAG
CGCGAGCGCT GGGAGCGCTT CCTGGAGTAC ACCCGTGCTC AGCTCCTCGA GCTGCTCGAG
CTCTACCCGC AGGTGAAGGG GCTGTGGTTC GACGGCACCT GGGACGCCTC CTGGGTCTCC
AGCTACGAGT TCGCGTACGC CCTGGAGCAG GAGCTGCGCG CCGCCGTGCC CGGCCTGATC
ATCGGCTCCC GCTTCCGGGC CGACGAGCAC GGCAGCCGCC ACGTCGACTC CAGCGGTGCG
CTGCTGGGCG ACTACCAGCA GGGCTGGGAG CGGAAGCTCC CCCAGGACAT CACCGTGCTG
GATGGGCAGG ACTGGGACTG TGTGATGACC ATCGCGCCCA ACGGCTGGGG CCACATCCGC
GACACCACCG GCCTGCACCT GAAATCCCCG CAGGAGATGA TCGAGCTGCT CATGCGCTGC
CGTTCGATGA ACGGGAACCT CGTGGTGAAC ATCGGCCCCG ACGGCGAGGG CCGGCTCTCA
TGCCACGAGC ACGAGATCAT GACGGCGCTC GGCGAGTGGA CCGAGCAGAA CGCGGCCGCC
GTGTACGGGG CGGGCCACGT GGAGCTTCCC GAGCCCCGCG CCGGGATCCT CACCGGTGAC
GGCCAGAGAG TGTTCGTCAC CGTGCTCGCG GTGCCGGTCT CGGGAGCGAT CCGTCTCGCC
GTGCCGAAGG ACTCCGCCCG GGTGCCGGTG ACGGCACGGT GCGAGGCCGC CTCCTCGCCC
GAGCTCGCCG TGCACCACCG CGACGTCGGC CTCGATCGCG ACCCGATGAC GTACTACGAC
GTCGACCTGC CCGCGCAGAT CCCGCCCGGC CGTCCCTTCG TGGTGACGGT CGAGCTCGGT
GAGGTGGGCG GCTCGGCGCA GGAGCTCATG GCGGCCCTGA CCTGA
 
Protein sequence
MPSPATAPAD DVRFGPLVGR RDDEAMRAFR SYGLGQFIHW GLYSMLGNEF EGRSARGHAA 
ASEWIRQWNP RTAPEGWPRQ YDALHRSFDP SDFDARRWAR EARQMGARYV IFTTKHHDGF
AMWPSAHSEY TIAATPYEGD IVGEIVEAYA AEGIDVFLYY SVLEWNHPDY MAHAPRTAQE
RERWERFLEY TRAQLLELLE LYPQVKGLWF DGTWDASWVS SYEFAYALEQ ELRAAVPGLI
IGSRFRADEH GSRHVDSSGA LLGDYQQGWE RKLPQDITVL DGQDWDCVMT IAPNGWGHIR
DTTGLHLKSP QEMIELLMRC RSMNGNLVVN IGPDGEGRLS CHEHEIMTAL GEWTEQNAAA
VYGAGHVELP EPRAGILTGD GQRVFVTVLA VPVSGAIRLA VPKDSARVPV TARCEAASSP
ELAVHHRDVG LDRDPMTYYD VDLPAQIPPG RPFVVTVELG EVGGSAQELM AALT