| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_02580 |
|---|
| Symbol | |
|---|
| ID | 8398806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 295321 |
|---|
| End bp | 296751 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644996349 |
|---|
| Product | arabinose efflux permease family protein |
|---|
| Protein accession | YP_003153725 |
|---|
| Protein GI | 257067470 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCCCCG ACCCCAGCGC ACTGAACCCA CCGGTGCGTC GCAAGCCCCT GCTCGCCGTC
CTGCTCGCTC CGCTGTTCAT GGCACTGATC GCCGTGAGCG TCATCAACGT CGCCCTCACC
GCGATCGGGG AGGGCCTCGA CGCCGATACC GGTGACCTGC AGTGGGTGAT CTCGGGCTAC
GCACTGGCCT TCGGGATGCT GCTGGTCCCC GCCGGGCGCG CGGGAGACGC CACGGGGCGG
CGCCGCATGT TCATCGTCGG CGTCGGGGTG TTCACCCTCG GCTCGCTGCT GTCCGGCATC
GCCCCCAATG CGGAGATGCT CAACGTCGCC CGCATCCTGC AGGGGCTCGG CTCGGGGCTG
CTGAACCCGC AGACCGTCGC CCTCATCCAG CAGCACTTCC GCGGCCAGGA CCGGGCGCGG
GCGTTCGCGC TGCTGGCCAC CACCGTCGCG GTCGCCACCG CGATCGGCCC CGTGGTGGGC
GGTGCGCTGA TCCAGATCCT CGGCCCCGAA TGGGGCTGGC GGTGGATGTT CCTGATGAAC
ATCCCGATCG GCGTGATCGC GATCATCGGC GCGTTCCGGT ACATCCCGGA TGACAAGGCG
CGCGGGAAGG GTCGCCCCGA TCTGGACCCG GTGGGCGCGG TGCTGCTGTG CCTGGCGATC
CTGGGGATCA TGCTGCCCTT CCTCGAGCGG GGCGTGAGCT CGCTGGTGTG GATGTCCTTC
CCGGGCGGGC TGCTGATCCT CGGCGTGTGG TGGGTGTGGG AGCGGCGCTA CAAGCGCCGC
GGGCGCAGCC CGATGGTCGA CACCGCGATC TTCCTCAACA AGGCGTTCCG CAACGGCATC
CTCATCGTCT CGGTGTACTT CCTCGGCGCC ACCAGCGTGT GGATCATCGT GCCGCTGTAC
CTGCAGATGC ACCTGGGCCA CACCGCCTTC GAGGCCTCCC TGATGGGTGT GCCCTCCTCG
ATCGCGGCCG CGGTCAGCTC GCAGATCTCG GGCCGCTACG TGCTCACCTT CGGGCGGCGC
ATGGTGATCG TCGGCTTCGG CGTCGCCTTC GTGGGCCTGG CCGGCACGGC GCTGGTCTCC
GGCTTCGTGG AGAACGGCGT GGTCCCCTTC TGGTGGCTGG CGCTGCCGCT GACCCTCATG
GGGCTCAGCC AGGGCATGAC CATCTCCCCG AACCAGACCC TCACCCTGAA CTCGGTGGAT
CCGCGGTTCG GCGGCGTCGC CGGGGGCATC CTGCAGCTCG GCCAGCGCAC CGGCGCCGCG
ATCGGCACCG CGATGATCCC GGGCATCATC TTCTCCCTCA CCGTGGCGGG CACCGCCTGG
CACGAGGCGT TCATCATCGC GCTGACGATT ATCATGGCCC TCACCCTGGC CGCGATGGGC
GTGAGCTTCG CCGACCGTGC GCGGGAGAAG GCGGGCAAGG GAGCGCTGTA A
|
|---|
| Protein sequence | MIPDPSALNP PVRRKPLLAV LLAPLFMALI AVSVINVALT AIGEGLDADT GDLQWVISGY
ALAFGMLLVP AGRAGDATGR RRMFIVGVGV FTLGSLLSGI APNAEMLNVA RILQGLGSGL
LNPQTVALIQ QHFRGQDRAR AFALLATTVA VATAIGPVVG GALIQILGPE WGWRWMFLMN
IPIGVIAIIG AFRYIPDDKA RGKGRPDLDP VGAVLLCLAI LGIMLPFLER GVSSLVWMSF
PGGLLILGVW WVWERRYKRR GRSPMVDTAI FLNKAFRNGI LIVSVYFLGA TSVWIIVPLY
LQMHLGHTAF EASLMGVPSS IAAAVSSQIS GRYVLTFGRR MVIVGFGVAF VGLAGTALVS
GFVENGVVPF WWLALPLTLM GLSQGMTISP NQTLTLNSVD PRFGGVAGGI LQLGQRTGAA
IGTAMIPGII FSLTVAGTAW HEAFIIALTI IMALTLAAMG VSFADRAREK AGKGAL
|
|---|
| |