Gene Bfae_02430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_02430 
Symbol 
ID8398791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp277913 
End bp278803 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content76% 
IMG OID644996335 
ProductRNA polymerase sigma factor, sigma-70 family 
Protein accessionYP_003153711 
Protein GI257067456 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGCAC CCGCTCCGCA CCCGCCGCAC TCGCCGACGC CCCCGCGGCA CGACCCCGAC 
GAGCTCGCCC GCGACCTCGA GCGGGAGCGT CCGCGCCTGG TCGCCCTCGC GACCCGGGTG
CTCGGCGACC CGGACGAGGC ACAGGACATC GTCCAGCAGG CCTGGCTGCG GCTGGCCGCG
GCCGACCGTG ACATCGAGAA CCTCCCGGCC TGGCTCACCA CGGTCACCAC CCGGCTGTGC
CTGGACCGGC TGCGCCGCCG CACCGCCGTC CCCGAGGCGG AGATCGCCCT CGAGGCGGCC
GCCCCCGACC CGGCGGAGGA TGTCGCCCTC GCCGACACCG TGGGCGCGGC CCTGCAGCTG
GTGCTGGAGC GGCTGAGCCC CAACGAGCGC GTCGCCTTCG TGATGCACGA CAGCTTCGGC
GTCGAGTTCT CCACCATCGC CGCGGCGCTG GGCACCACCG CGCAGAACGC CCGGAAGCTC
GCCTCCCGCG CCCGGGCCAA GGTCGCCCAG CCCCGTCCGG AGGACGCGCT GGCCGACTGG
GAGGTGGTCG ACGCGTTCAT GGCCGCCGCC CGCGGCGGGG ACTTCACCCG CCTGGTGCAG
CTGCTCGCTC CCGACGCGGT GGTGCGCGCC GACGCCGACG CCATCGCGAC CGGCACCCCG
GAGGCGATCG AGGGCCGCGA GGACATCGCG AGCTTCTTCA ACGGCGCGGC GCATGCCGCT
CTGCCGGTCA GCGTCGACGG CCGCCCCGGC TCGGCCTGGT ACCACCGCGG CCAGGCCAGG
GTGCTGTTCG ACTTCATGGT CACCGGCGGG TGCGTCGCCC GCATCGACTT CCGTGCCGCT
CCCGAGGTGA TCGCCCAGGT GGTGCGCCGC GACGGCGCCG CCCCGCGATG A
 
Protein sequence
MEAPAPHPPH SPTPPRHDPD ELARDLERER PRLVALATRV LGDPDEAQDI VQQAWLRLAA 
ADRDIENLPA WLTTVTTRLC LDRLRRRTAV PEAEIALEAA APDPAEDVAL ADTVGAALQL
VLERLSPNER VAFVMHDSFG VEFSTIAAAL GTTAQNARKL ASRARAKVAQ PRPEDALADW
EVVDAFMAAA RGGDFTRLVQ LLAPDAVVRA DADAIATGTP EAIEGREDIA SFFNGAAHAA
LPVSVDGRPG SAWYHRGQAR VLFDFMVTGG CVARIDFRAA PEVIAQVVRR DGAAPR