Gene BcerKBAB4_4496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcerKBAB4_4496 
Symbol 
ID5844711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus weihenstephanensis KBAB4 
KingdomBacteria 
Replicon accessionNC_010184 
Strand
Start bp4491200 
End bp4492366 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content42% 
IMG OID641379606 
Producthistone deacetylase superfamily protein 
Protein accessionYP_001647281 
Protein GI163942397 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGCG CCTTCATTTA TTCGGATGAC TTTCGGGGCT ATTCATTTAG CCCTGATCAT 
CCTTTTAACC AACTGCGTGT CACACTCACG TATGATTTAT TACAAAAGAG CGGTTTTATC
TCTCCCTCTC AAGTCATCGC GCCACGGATG GCTACAGATG AAGAGATTGC CTACGTTCAT
ACAGCGGAGT ACATAAATGC GGTAAAACTC GCTGGAGAAG GTAAGTTAGA AAAATCAATT
GCGATGACAT ACGGACTTGG AACAGAAGAT ACACCGATGT TTCCAAATAT GCACGAAGCA
AGTGCATTAC TCGTTGGCGG AACATTAACA GCTGTCGATG CTGTTATTTC TGGGAAAGTA
AAGCACGCCC TCAATTTAGG CGGCGGCTTA CATCATGGCT TTCGTGGTAA AGCATCTGGC
TTTTGTATTT ATAACGATAG CTCTATCGCA ATGAAATATA TTCAGAAGAA ATACGGTTTA
CGCGTTTTAT ATATTGATAC AGATGCTCAT CACGGTGACG GGGTACAATG GTCTTTTTAC
GACGATCCTA ACGTATGCAC CATTTCATTA CACGAAACTG GGCGTTATTT ATTTCCTGGA
ACTGGCGCAG TAAATGAACG TGGACAAGGA AATGGATATA ATTATTCTTT TAACGTTCCA
CTCGACGCTT TTACAGAAGA CGAATCGTTT TTAGATTCAT ATCGAACAGT TGTAAAAGAA
GTGGCAGCAT ACTTTAAACC GGATATTATT TTAACGCAAA ATGGTGCTGA TGCACATTAT
TACGATCCAC TTACACACCT TTGCGCAACG ATGAATATTT ACCGTGAAAT ACCGAAGCTC
GCTCGTGAAA TCGCTAATGA ATATTGCGAC GGTCGCTGGA TTGCTGTCGG CGGTGGTGGC
TATGATCACT GGCGCGTCGT ACCAAGAGCT TGGGCACTCA TTTGGCTCGA AATGAACAAA
ATCCAAAACA TCTCAGGTTA TCTCCCTCCA GAATGGATTG ACGCTTGGAA AGGACAAGCA
GAAACCGACC TTCCCCTTAC ATGGGAAGAT CCAGACAACA TGTATCAACC TATCCCTAGA
AAACCAGAAA TCGAAGAAAA AAATGCATTA ACTGTAGCGA AATCTCTTGA AATTATTCGG
AATAATATGA CAAAATCTTT ATATTAA
 
Protein sequence
MSSAFIYSDD FRGYSFSPDH PFNQLRVTLT YDLLQKSGFI SPSQVIAPRM ATDEEIAYVH 
TAEYINAVKL AGEGKLEKSI AMTYGLGTED TPMFPNMHEA SALLVGGTLT AVDAVISGKV
KHALNLGGGL HHGFRGKASG FCIYNDSSIA MKYIQKKYGL RVLYIDTDAH HGDGVQWSFY
DDPNVCTISL HETGRYLFPG TGAVNERGQG NGYNYSFNVP LDAFTEDESF LDSYRTVVKE
VAAYFKPDII LTQNGADAHY YDPLTHLCAT MNIYREIPKL AREIANEYCD GRWIAVGGGG
YDHWRVVPRA WALIWLEMNK IQNISGYLPP EWIDAWKGQA ETDLPLTWED PDNMYQPIPR
KPEIEEKNAL TVAKSLEIIR NNMTKSLY