Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_3994 |
Symbol | |
ID | 5844206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | - |
Start bp | 4021688 |
End bp | 4022347 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641379109 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001646787 |
Protein GI | 163941903 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0526601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCTAG ATTTTTCGGC AATTACGCCT TCAATACCAT ATATATTAAA GGGATTAGAA GTTACATTGA AAATTGTAGC TGCATCAGCT GTGGTAGGAT TTATTTTAGG AACGTTATTA GCACTTTGCA AAATTGCTAG AATACGAGTA TTAAATATTG CAGCAGATAT TTATACGTCA ATATTTCGTG GCACACCGCT AGTATTACAA TTAATGATTA TTTATTTCGG TGTTCCGCAA ATGATGGGTT ATGAGATACC GGCCTTTTTA GCAGCTGTAC TTGCATTTAG CTTAAATTCA GGTGCATATA TGTCAGAAGT AATTCGTGCC GGCATTCAAG CAGTCGATAA AGGACAAACA GAAGCAGCAA TGGCTTTAGG TATTCCTTAC AGTAAAATGA TGAGAAATAT TATTTTTCCT CAAGCTTTAA AAAATATATT ACCAGCACTT GTGAATGAGT TTGCGACACT TACGAAAGAG TCGGCTGTAG TAACCGTAAT AGGAGCGACT GATTTAATGC GCCGTGCTTA TATTGTAGGT GGTGAAACAT TTAAATATCT TGAGCCATTA CTTTTTGTTG GACTTATTTA TTATATATTA GTAATTATTC TTACATTAGT TGGGAAAACC ATTGAAGGGA GAATGAAGAA AAGTGATTAA
|
Protein sequence | MNLDFSAITP SIPYILKGLE VTLKIVAASA VVGFILGTLL ALCKIARIRV LNIAADIYTS IFRGTPLVLQ LMIIYFGVPQ MMGYEIPAFL AAVLAFSLNS GAYMSEVIRA GIQAVDKGQT EAAMALGIPY SKMMRNIIFP QALKNILPAL VNEFATLTKE SAVVTVIGAT DLMRRAYIVG GETFKYLEPL LFVGLIYYIL VIILTLVGKT IEGRMKKSD
|
| |