Gene BcerKBAB4_3069 details

Gene Information

• Locus tag: BcerKBAB4_3069
• ID: 5843281
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus weihenstephanensis KBAB4
• Kingdom: Bacteria
• Replicon accession: NC_010184
• Strand: -
• Start bp: 3118756
• End bp: 3119256
• Gene Length: 501 bp
• Protein Length: 166 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 641378199
• Product: RNA polymerase sigma factor SigM
• Protein accession: YP_001645877
• Protein GI: 163940993
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family; [TIGR02950] RNA polymerase sigma factor, SigM family

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.228277
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATTG AAGAAATATA TAAGGTTTAT ATAAACGATG TGTACCGGTA TTTATTTTCC 
CTTTCTCGTA GCCATCACGT AGCGGAGGAC TTGATGCAGG AGACTTTTTA TCGGGCGTAT 
CTTTATCTAG AAGACTATGA AAACCAAAAG GTAAAATCAT GGCTTTTTAA AGTGGCATAT 
CATACGTTTA TTGATTTTGT AAGGAAAGAG AAAAAAGTAT CTTTTGTAGG AACGGAGGAA 
TTAGAGACAA TACAAGCAGG GGAATCTACA GAAGAGTATG TAGTCGCAAA AAATAGTTAT 
GAAAAATTAA TTCAGATTAT TCATACTTTA CCAGTGGTAG AGGCACAAGC TATTTTATTA 
TGTGACGTAC ATCAATTAAC GTACGAAGAG GGTGCTACTG TATTAGATTT AAAGGTAAAT 
ACTTATAAAA GTCACATATT TCGTGGGAGA AAGAGATTAA AAGAATTGTT AAAGGAGGAA 
AAGAGTCAAA ATGACAAATG A 

 

Protein sequence

MEIEEIYKVY INDVYRYLFS LSRSHHVAED LMQETFYRAY LYLEDYENQK VKSWLFKVAY 
HTFIDFVRKE KKVSFVGTEE LETIQAGEST EEYVVAKNSY EKLIQIIHTL PVVEAQAILL 
CDVHQLTYEE GATVLDLKVN TYKSHIFRGR KRLKELLKEE KSQNDK