Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_2818 |
Symbol | |
ID | 5843030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | - |
Start bp | 2867697 |
End bp | 2869148 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641377963 |
Product | general substrate transporter |
Protein accession | YP_001645641 |
Protein GI | 163940757 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.139895 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAACAAA ATAATGATTT AAATTTTGAA CCTCAAGACG TTAATATTGT CAATTCTAAA CAAGCGAAAA AAGCAGTTAT TGCTACTGGC ATTGGGAATG CAATGGAGTG GTTTGACTTT GGATTATACG CGTATTTAGC GGTAATTTTA AGTCAATTAT TCTTCTCAGG TGTGGATAAT AGTGGTTTGC AACTTGTACT AACATTTGGT ACATTTGCGG CGGCCTTTCT CGTTCGACCA ATCGGAGGTA TTTTCTTTGG TAGAATAGGA GATAAATACG GCCGAAAGAT TGTTTTAAGT ACAACTATTA TTTTAATGGC ACTTTCTACA TTATTCATCG CATTACTACC AACCTATGAA CAAATTGGTG TATGGGCACC AATACTACTT TTAATTGCTC GAATGATTCA AGGCTTCTCT ACAGGCGGCG AATATTCAGG TGCAATGGTT TATATCGCAG AATCTTCTCC AGATAAAAAG CGTGGTATAC TCGGTAGTGG TCTTGAAATT GGAACACTCT CAGGTTACAT TGCTGCCTCG GTAATTGTTA CCATTTTAAC GTTATTATTA ACAGATGAGC AAATGCTCAG CTGGGGATGG CGTATTCCTT TCTTAATTGC TGCACCAATT GGTTTGGTCG GTTTATATTT ACGACGTCAT TTAGATGAAT CTCCAATCTT TCAAGAGATG GAAAAAGCAC AAGAGGAATC TGAAGACAAC GAACAATTTT CATTTATGGA TATATTAAAA TATCACAAAA AAGACTTCTT ATTAAGCACA GTAATTGTTG CCTTCTTTAA CATTACAAAC TATATGATCC TTTCGTATAT TCCTTCTTAT TTAACACAAG TACTAAAAGT CAAAGAAACA ACTGGCTTAT TAATTATTTC AATTACGATG GCACTTATGA TTCCACTGGC ACTTTATTTC GGTAAATTAA GTGATAAAGT AGGTAATAAA CGCGTAGTGC AAATTGGTTT ACTTGGTTTA GCATTATGTT CAATTCCAGC ATTTTTATTA ATTGGTAACG GACATATTGT AGCCATGTTT GCGGGTATTT TCATTTTAGG TTTCTTCCTT AGTGTTTATG AAGGAACATT GCCTTCGTTA TTACCAGCAC TCTTTTTCAC CGATGTACGT TATCGTGCGC TTTCTATCTC CTTTAATATT TCTGTATCTA TATTCGGTGG TACAACGCCG CTTGTATGTT CATACTTAGT TCATGCTACT GGTAATCCAC TGGCACCAGC ATTTTATTTA ACTGGTGTAA GTGTAATTGG ATTAATTGTG TTTAGTGTAC TGTTTGTCAC AACATCAGGA CGTGCACTAA AAGGTTCTTA CCCTACTGTA GAATCGAAAA AAGAAGCACA TCAAATTGCT AAAGAGGATC CTGAAGAAAC ACTTTGGTGG CATGAAGAAT CTTTAGAAAT TGAAGCAGGA AAAAAAGCAT AA
|
Protein sequence | MQQNNDLNFE PQDVNIVNSK QAKKAVIATG IGNAMEWFDF GLYAYLAVIL SQLFFSGVDN SGLQLVLTFG TFAAAFLVRP IGGIFFGRIG DKYGRKIVLS TTIILMALST LFIALLPTYE QIGVWAPILL LIARMIQGFS TGGEYSGAMV YIAESSPDKK RGILGSGLEI GTLSGYIAAS VIVTILTLLL TDEQMLSWGW RIPFLIAAPI GLVGLYLRRH LDESPIFQEM EKAQEESEDN EQFSFMDILK YHKKDFLLST VIVAFFNITN YMILSYIPSY LTQVLKVKET TGLLIISITM ALMIPLALYF GKLSDKVGNK RVVQIGLLGL ALCSIPAFLL IGNGHIVAMF AGIFILGFFL SVYEGTLPSL LPALFFTDVR YRALSISFNI SVSIFGGTTP LVCSYLVHAT GNPLAPAFYL TGVSVIGLIV FSVLFVTTSG RALKGSYPTV ESKKEAHQIA KEDPEETLWW HEESLEIEAG KKA
|
| |