Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_2192 |
Symbol | |
ID | 5842405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | + |
Start bp | 2256569 |
End bp | 2257276 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641377362 |
Product | RNA-binding S4 domain-containing protein |
Protein accession | YP_001645040 |
Protein GI | 163940156 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.731966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGTATCA ATAAATTTAT TAGTGAAGCT GGAAAAGCGT CTCGACGTGG AGCAGATAAG TTAATTAACG AGAGAAAAGT AATTATTAAC GGTAAGGTTG CAAAAATTGG TGACCAAGTA AATCCAGGTG ATGACGTACG AGTAAATGGA GAGCAACTTC GTATTGCTCG AGACCATGTG TATATCGCTT TAAATAAACC AGTAGGTATT ACATGTACAA GTGAAAAAGC CGTAAAAGGT AACATTATCG ATTTAGTGAA TCATCCTTTA CGAATTAATC ACATCGGACG TCTCGACAAA GACTCAGACG GTTTAATTTT GTTAACGAAT GATGGCGATA TCGTTAATGA GATTTTACGT GCTGAAAACA AACATGAGAA AGAATATATC GTTTCAGTAG ATAAGCCGAT TACACCGGAG TTTTTAGAAA AAATGGCAGC AGGTGTTAAA ATTTTAGATA CAAAAACACT TCCTTGTGAA GTAACACAGT TATCAAAATA TGAGTTTGAA ATTATTTTAA CACAGGGGCT AAATCGTCAA ATTCGCCGTA TGTGTGAAGC TTTGGGTTAT CAAGTATACA CGTTAAAACG TACGAGAATT ATGAATATTG AGTTGAATAA TTTACCAGTC GGACAGTGGA GAGATTTATC GAAAAAAGAG AAAAAACGCC TATTTTCAGA CTTAAATTAC GAACCACAAG ATTGGTAA
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Protein sequence | MRINKFISEA GKASRRGADK LINERKVIIN GKVAKIGDQV NPGDDVRVNG EQLRIARDHV YIALNKPVGI TCTSEKAVKG NIIDLVNHPL RINHIGRLDK DSDGLILLTN DGDIVNEILR AENKHEKEYI VSVDKPITPE FLEKMAAGVK ILDTKTLPCE VTQLSKYEFE IILTQGLNRQ IRRMCEALGY QVYTLKRTRI MNIELNNLPV GQWRDLSKKE KKRLFSDLNY EPQDW
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