Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_2166 |
Symbol | |
ID | 5842379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | + |
Start bp | 2223539 |
End bp | 2224696 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641377337 |
Product | nuclease SbcCD, D subunit |
Protein accession | YP_001645015 |
Protein GI | 163940131 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0226896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTTT TTCATACAGC GGATTGGCAT TTAGGTAAGC TTGTTCATGG TGTATATATG ACTGAAGATC AAAAAATTGT GTTAGATCAG TTTGTACAAG CTGTTGAAGA GGAAAAACCG GATGCTGTAA TTATTGCAGG AGATTTATAT GACCGAGCAA TTCCACCTAC AGAAGCAGTA GACTTATTAA ATGATGTATT ACAAAAGATA GTTATTGATT TACAAACACC AATAATCGCA GTTGCAGGAA ACCACGATAG TCCGGACCGC ATACATTTTG GTAGTAATTT AATGAAAAAA CAAGGATTAC ATATTGTTGG ACAATTCCAG TTTCCATACA ATCCTGTTGT TTTAAATGAT GAATACGGAG AGGTTCATTT CCATCTCGTT CCGTATGCAG ATCCAAGTAT TGTTAGACAT ATATTGAAAA ATGAAGATGT TCGTTCTCAT GATGATGCGA TGCGTATTTT TATGAACGAA CTCTCTGAAA CGATGGATAA AGAAGCGAGA CACATATTTG TAGGACATGC ATTTGTAACT TCTTCAGGAG AGGCAGAGGA AAATACGAGT GATGCGGAAC GACCACTTTC AATTGGTGGT GCTGAATATG TAAATAGCCA TTATTTTGAT AAGTTTCATT ACACGGCGCT TGGCCATTTA CATCAAGCGC GTTTTGTACG TAATGAGACA ATTCGTTATT CAGGTTCACC ACTTGCATAT TCTATTTCTG AAGAAAAGCA TAAAAAAGGA TATTATATTG TGGAACTGGA TGAAAAAGGT GAAACAACAA TTGAAAAACG TTTACTTACA CCACGTCGTA AAATGCGTAC AGTAGAAGCG AAAATAGACG ATTTATTGCT TCATCCAGTG AGTGAAGATT ATGTATTTGT GAAATTATTA GATGAAAATC CTGTCTTGCA GCCAATGGAA AAAATACGTT CTGTATACCC AAATGCAATG CATGTTGAAA GATCTATTCA AAGACGAGAG TTCACAGATG AAAATGAAGT AACTGTTTCA AGACATAAAA CGGATGATTT ATCTCTTTTA AAAGCATTTT ATAAAGAAAT GAAAGGGCTA GATTTATCAG AAGAGAAAGA ACGTCTATTT TTAGATGTTT TGCAAACAGT GCAAGAACGG GAAGGTGAGC GAGGATGA
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Protein sequence | MKFFHTADWH LGKLVHGVYM TEDQKIVLDQ FVQAVEEEKP DAVIIAGDLY DRAIPPTEAV DLLNDVLQKI VIDLQTPIIA VAGNHDSPDR IHFGSNLMKK QGLHIVGQFQ FPYNPVVLND EYGEVHFHLV PYADPSIVRH ILKNEDVRSH DDAMRIFMNE LSETMDKEAR HIFVGHAFVT SSGEAEENTS DAERPLSIGG AEYVNSHYFD KFHYTALGHL HQARFVRNET IRYSGSPLAY SISEEKHKKG YYIVELDEKG ETTIEKRLLT PRRKMRTVEA KIDDLLLHPV SEDYVFVKLL DENPVLQPME KIRSVYPNAM HVERSIQRRE FTDENEVTVS RHKTDDLSLL KAFYKEMKGL DLSEEKERLF LDVLQTVQER EGERG
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