| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BcerKBAB4_1557 |
|---|
| Symbol | fliD |
|---|
| ID | 5841771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus weihenstephanensis KBAB4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010184 |
|---|
| Strand | + |
|---|
| Start bp | 1607800 |
|---|
| End bp | 1609176 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641376752 |
|---|
| Product | flagellar capping protein |
|---|
| Protein accession | YP_001644430 |
|---|
| Protein GI | 163939546 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1345] Flagellar capping protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00112262 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGGA CAATATCTAA TTATGGTGAC AGACAGCAAA TATGGAATTT AGGAAATAAC
ATGATAGATA CAAAGAAGTT AGTAGATTTA GAGTTACAAG CATTGGAAAT GAAAAAATCA
CCATATACTA CACAAAAACA AACGTTAACA AATGAAAACA AAGTGTATGC GAGCATGAAA
AAAGAGTTTG CAAATTTTGT GCAAGTATTC AAAGATTTAA ACACATTTAA AGGTGATGAA
AAGAAAACAA CTCTATCCAA AGATGGTTTT ATGACAGCAC AGGCGGATGC TGCTGCAATT
CCTGGAACAT ACACAATTAC AGTAGAGCGA GTAGCAGAAA GGCATCAAAT AACTACAGCT
CCACTTACTC CCCCAAAAAC TCCTGAAGGT ACGGAGCAAA AATTCAGTTT AGATTTAAAG
CTTGGAGTAG ATGATGTATT TCAGATAAAT GGAAAAGAAG TTAAAATTTC GGAAGATATG
ACGTATAAAG ATCTTGTCAA TAAAATTAAT AATGGAAATT ATGGTGTATC CGTATACACA
TTAGGGGATC AACTATTTTT CACATCTACT ATTGCAGGAA AAGAGGGAGA GCTGAAATTA
ACGGATGGTG CCAATGGCTT TTTACAAAAT ATAGGGCTGG TTACTTCTGC GAAAAATACG
GATGGAACGA ATGCCATTGC ACATCAAGTG ACAGGAGCAG TAAATGCAGA ATATACAATA
AATGGAATTA AAGGAACTAG TAAAACAAAT AAGATTGATA CAATTCCAGG ATTAACTATT
AACTTAGAAA AGGTAACTAC AGAGCCAATT AAATTAACTA TCGAAGATTC AGATATAAAA
AATTCGATAG ATTTAATCAA AAAAATGAAA GATGAGTATA ATAACGCTGT TAAAAGTTTA
GATTTGTTTT CTGGTGAAAA TGGAGTAATG CAAGGGAATA ATGTTTCATT TGCTATCAGT
AATGCAATGA CAAGCATTTT TAGATTTTCC CAAGATGATA AGTATTTATT TTCTTTTGGG
ATTCAAATTG ATAAAACAGG AAATATGACT CTTGATGAAG AGAAATTGAA AATAGCTTTT
AAAGAGAATC CAGAATCTAC AAAACAATTT TTCTTTGGTT TTAATGGCAT TGGTCATGAT
ATAGATAAAA AGCTCGAGGG AATCTTTGGA GATGAAGGGA TTATTGGAAA ACGCTCTAAA
AGTATTGAAA AGCAAGTAAC TGATTTAGAG AGAAAAATTC AAGATATTGA TACAATTAAT
AAGAAAAAAC AAGAATCAAT TATTGATAAA TATGCAAAGT TGGAAAGCCA GCTAGCATTG
CTTGATAGTC AGCTGCAGAC AATCAAAGCA ATGACAAAAA CAAAAAGTGA TGATTAA
|
|---|
| Protein sequence | MAGTISNYGD RQQIWNLGNN MIDTKKLVDL ELQALEMKKS PYTTQKQTLT NENKVYASMK
KEFANFVQVF KDLNTFKGDE KKTTLSKDGF MTAQADAAAI PGTYTITVER VAERHQITTA
PLTPPKTPEG TEQKFSLDLK LGVDDVFQIN GKEVKISEDM TYKDLVNKIN NGNYGVSVYT
LGDQLFFTST IAGKEGELKL TDGANGFLQN IGLVTSAKNT DGTNAIAHQV TGAVNAEYTI
NGIKGTSKTN KIDTIPGLTI NLEKVTTEPI KLTIEDSDIK NSIDLIKKMK DEYNNAVKSL
DLFSGENGVM QGNNVSFAIS NAMTSIFRFS QDDKYLFSFG IQIDKTGNMT LDEEKLKIAF
KENPESTKQF FFGFNGIGHD IDKKLEGIFG DEGIIGKRSK SIEKQVTDLE RKIQDIDTIN
KKKQESIIDK YAKLESQLAL LDSQLQTIKA MTKTKSDD
|
|---|
| |