Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_1020 |
Symbol | |
ID | 5841232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | - |
Start bp | 1098480 |
End bp | 1098965 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641376219 |
Product | RNA polymerase sigma factor |
Protein accession | YP_001643899 |
Protein GI | 163939015 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02950] RNA polymerase sigma factor, SigM family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.585247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACGCA AACAATCATT AGAAGAAATT TACTCCGAGC ATATGCAAGA TTTATTTCGC TATCTTCTCT CCCTAACCGG AGATTCTCAT AGTGCTGAAG ATCTCATGCA AGAAACATTT TACCGAATGC TCGTCCATAT TGACTATTAT AAAGGAGAAG AAATTAGGCC GTGGTTATTT ACAATCGCCT ACAACGCCTT TATCGATTGG TACCGAAAAG AAAAGAAGTA TAAAACAACG CAAATTGAAG AATTCCATTT ACCAAACGTG CCAAGTACAG AACACTCTTA TTTCGTAAAA CATGAGATTG CTAGTTGGTT ACAAAGTATA TCCTCTCTTC CGCTCGAAAG ACGAAATGTG TTACTACTAC GAGATTACTA CGGATTCTCT TATAAGGAAA TAGCAGAAAT GACTGGTCTC TCGTTAGCAA AAGTAAAAAT TGAATTACAC CGAGGACGAA AAGAAACGAA AAGCATAAAG GAGTGA
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Protein sequence | MKRKQSLEEI YSEHMQDLFR YLLSLTGDSH SAEDLMQETF YRMLVHIDYY KGEEIRPWLF TIAYNAFIDW YRKEKKYKTT QIEEFHLPNV PSTEHSYFVK HEIASWLQSI SSLPLERRNV LLLRDYYGFS YKEIAEMTGL SLAKVKIELH RGRKETKSIK E
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