Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BcerKBAB4_0541 |
Symbol | |
ID | 5840731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus weihenstephanensis KBAB4 |
Kingdom | Bacteria |
Replicon accession | NC_010184 |
Strand | + |
Start bp | 627031 |
End bp | 628734 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641375732 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_001643435 |
Protein GI | 163938551 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAGAAC AAAGAGGTCA TGCATTATAT GACTCTTCAT TGCAAGATTT AAAATTAGCA TTAGATGAGT CTTCAATTGT TGCTATTACA GACCGAAATG GTCTTATTAC ATATGTGAAT GATAAATTTT GTAAAATCTC AAAATATAAA AGAGAAGAGT TAATAGGAAA AGATCACCGT ATTTTAAATT CCGGATATCA TCCGAAAGCA TTTTTTCAAA TCCTATGGAA GCGTATTTTG AGTGGAAAAG TCTGGACAGG GGAAATTCGA AATCAAGCAA AAGATGGTAC GTATTATTGG GTTAAAACAA CAATTGTTCC ATTTTTAAAT GAAAAGGGAG AACCTTATCA ATTTATTGCA ATTCGAAATG ATATAAGTAG TAGGAAAGAA GCAGAACAAA GATTACGATT AAGCGAAAGT CGTTATAGGG AACTTGCTTA TCATGATGCG TTAACAAGTT TACCGAACCG TTTACAGTTA ATTACGACTG TAAATAAGAT GATTGCAGAG AAAATAGAGT TTGGCATGAT TTACTTTGAT TTAGATCGTT TTAAATTAGT GAATGATACG TTAGGTCATA TGATAGGAGA TTTACTTTTA AGCGAAGTTG CTTCACGGTT GCATTATGTG CTAGGAGAGA AAGATGTTCT GGCTAGGCTT GGTGGCGACG AATTTGTGCT GTTAACAAAA ACTCATACAC ATGATGAGAT GAGGCAGTTA GCGACATCCG TGTTATCATG CTTTCAAGCG CCATTTATGC TTGAAGGTCA TGAAGTATAT ATTTCAGCTA GTCTAGGACT TTGTTCCTAT CCGCAAGATG GAAAAGACGT TGAAACGTTA TTGAAAAATT CGGATTTAGC CATGTATAGT GCGAAAGAGC AAGGAAGAAA TGCGGCGTGC TTCTTTACAG ATGAATTACG TGCGAAAATA AACCGTAGAA TGAAAATAGA ATTTGCTTTG CAAAAAGCGA TTCGTGACGA AGAATTAAAA GTGGCATTAC AACCCATTAT TGATTTGAAA ACAAAGAAAT GTACTGGTAT TGAGGCTTTA GTACGCTGTA AGACAGAAGA AGGTCCTATT TCACCAAGTG AATTTATCCC TGTAGCTGAA GAGTGTGGAC TTATTATAAA ACTAGGAGAC TGGGTACTAG AAAAGTCATG TCGACTGTTT AAAACTTTAC CAGATTATCA AGAGGGACTG AAGTTATCTG TTAATTTATC AATACAACAA TTGATGCAAA AGCGATTTAT TTTATCTGTT CGTAGTATAT TGAAGCGAAC AGGGTTTCCG CCAAATCGTT TAATATTAGA AATAACAGAA AGTATAGCTG TACGCCATTT TGATTATATT ATTGCTACAT TACAAGAATT GAGAAGTATG GGAATTTTAA TCGCTTTAGA CGATTTCGGA ACAGGGTATT CCTCATTATA TTATTTAAAA CAACTACCAC TTGATATTGT GAAAATTGAT CGTAATTTTA TTCGTGAGTT TCATTATGAT CATGCACAAC CAGAGCGAAC GATTGTAAAA TCGGTTATTG AAATCGCCCA TAGTTTAAAT TTATTAGTGG TTGCTGAAGG GGTAGAAACG GTAGAACAAG AAAGTTTATT AAAATCAATG AGTTGCGACT TTGTACAAGG TTTTTATTAT GCGAAACCGT TAGATATAGG GGAACTAAAA GAAAAGTTAT TAACTGATTT TTAA
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Protein sequence | MLEQRGHALY DSSLQDLKLA LDESSIVAIT DRNGLITYVN DKFCKISKYK REELIGKDHR ILNSGYHPKA FFQILWKRIL SGKVWTGEIR NQAKDGTYYW VKTTIVPFLN EKGEPYQFIA IRNDISSRKE AEQRLRLSES RYRELAYHDA LTSLPNRLQL ITTVNKMIAE KIEFGMIYFD LDRFKLVNDT LGHMIGDLLL SEVASRLHYV LGEKDVLARL GGDEFVLLTK THTHDEMRQL ATSVLSCFQA PFMLEGHEVY ISASLGLCSY PQDGKDVETL LKNSDLAMYS AKEQGRNAAC FFTDELRAKI NRRMKIEFAL QKAIRDEELK VALQPIIDLK TKKCTGIEAL VRCKTEEGPI SPSEFIPVAE ECGLIIKLGD WVLEKSCRLF KTLPDYQEGL KLSVNLSIQQ LMQKRFILSV RSILKRTGFP PNRLILEITE SIAVRHFDYI IATLQELRSM GILIALDDFG TGYSSLYYLK QLPLDIVKID RNFIREFHYD HAQPERTIVK SVIEIAHSLN LLVVAEGVET VEQESLLKSM SCDFVQGFYY AKPLDIGELK EKLLTDF
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