Gene Bcer98_3956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_3956 
Symbol 
ID5344394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp4015997 
End bp4016689 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content37% 
IMG OID640841439 
Productantiholin-like protein LrgB 
Protein accessionYP_001377135 
Protein GI152977618 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1346] Putative effector of murein hydrolase 
TIGRFAM ID[TIGR00659] conserved hypothetical protein TIGR00659 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGTA CAATGACTCC ATATTTCGGA ATTGTTGTTT CATTAATTGC ATACGGGATC 
GGAACATTCT TATTTAAGCA CTCAAAACAA TTTTTCTTAT TTACACCGCT ATTTGTAGCA
ATGGTATTAG GGATTGGCTT TTTAAAGGTT GGAAATTTCA CATTTGAAGA ATATAATACT
GGTGGTAAAA TCATTAGCTT CTTTCTAGAG CCAGCTACAA TTGCTTTTGC AATTCCATTA
TATAAACAAG CTGATAAATT GAAAAAATAT TGGTGGCAAA TCTTATCTGC TATCATTGTC
GGTTCTATTT GTTCAGTAGT GGTTGTGTTC ATTGTTGCAA AAGCTATTCA TTTAGATACA
GCTATTATGA ATTCTATGTT GCCACAAGCA GCAACAACAG CAATTGCATT GCCTTTATCA
GAAAGTATCG GTGGTATTCC AGCCATTACA TCTTTTGCTG TTATCTTTAA CGCGGTAATT
GTATATGCGC TTGGAGCATT ATTCTTAAAA ACATTTAGGG TCAAAAATCC AATTGCGAAA
GGATTAGCAT TAGGAACAGC AGGACACGCA CTCGGCGTTG CAGTCGGAAT TGAAATGGGT
GAAGTGGAAG CAGCGATGGC AAGTATTGCA GTAACAGTAG TTGGGGTTGT AACAGTTGTT
GTTATTCCAT TGTTTATGCC GCTGATTGCG TAA
 
Protein sequence
MASTMTPYFG IVVSLIAYGI GTFLFKHSKQ FFLFTPLFVA MVLGIGFLKV GNFTFEEYNT 
GGKIISFFLE PATIAFAIPL YKQADKLKKY WWQILSAIIV GSICSVVVVF IVAKAIHLDT
AIMNSMLPQA ATTAIALPLS ESIGGIPAIT SFAVIFNAVI VYALGALFLK TFRVKNPIAK
GLALGTAGHA LGVAVGIEMG EVEAAMASIA VTVVGVVTVV VIPLFMPLIA