Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcer98_3065 |
Symbol | |
ID | 5345450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cytotoxicus NVH 391-98 |
Kingdom | Bacteria |
Replicon accession | NC_009674 |
Strand | - |
Start bp | 3109821 |
End bp | 3110534 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640840561 |
Product | sporulation sigma factor SigK |
Protein accession | YP_001376286 |
Protein GI | 152976769 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02846] RNA polymerase sigma-K factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTTTAT TCGCCGCAAT TGGATATATG GTTCGTGAAG TGTTTGTGTT TGTTTCTTAT GTGAAAAACA ATGCGTTTCC ACAACCATTG TCACCAGATG ACGAAAAAAA GTACTTAGAG TTAATGGAGC AAGGGGATGC TCAAGCGAGA AACTTATTGA TTGAACATAA CTTGCGGCTT GTGGCCCACA TTGTTAAGAA ATTTGAAAAC ACAGGTGAAG ATGCAGAAGA TTTAATCTCA ATCGGCACAA TTGGGCTTAT TAAAGCGATT GAAAGCTATT CAGCAGGGAA AGGAACAAAG CTTGCAACAT ATGCAGCACG CTGTATTGAA AATGAAATTT TAATGCATCT CCGCGTTTTG AAGAAAACAA AAAAGGATGT TTCACTTCAT GACCCGATTG GGCAAGATAA AGAGGGTAAT GAAATATCAC TTATCGATAT TTTGAAATCT GAATCAGAAG ACGTGATCGA TATGATTCAA CTTAGTATGG AGTTAGAAAA AATTAAAGAG TACATTGATA TTTTAGATGA GAGGGAGAAA GAAGTTATTG TAAAGCGTTT TGGACTCGGA CTGGATAAGG AGAAAACGCA GCGAGAAATC GCAAAGGCGC TTGGGATTTC CAGGAGCTAT GTATCAAGAA TTGAGAAGCG AGCACTGATG AAAATGTTTC ATGAATTTGT GAGGGCGGAG AAAGAGATGA AAGCAAAGGA ATAA
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Protein sequence | MSLFAAIGYM VREVFVFVSY VKNNAFPQPL SPDDEKKYLE LMEQGDAQAR NLLIEHNLRL VAHIVKKFEN TGEDAEDLIS IGTIGLIKAI ESYSAGKGTK LATYAARCIE NEILMHLRVL KKTKKDVSLH DPIGQDKEGN EISLIDILKS ESEDVIDMIQ LSMELEKIKE YIDILDEREK EVIVKRFGLG LDKEKTQREI AKALGISRSY VSRIEKRALM KMFHEFVRAE KEMKAKE
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