Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcer98_2771 |
Symbol | |
ID | 5344235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cytotoxicus NVH 391-98 |
Kingdom | Bacteria |
Replicon accession | NC_009674 |
Strand | - |
Start bp | 2853070 |
End bp | 2853828 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640840273 |
Product | sporulation sigma factor SigF |
Protein accession | YP_001375999 |
Protein GI | 152976482 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02885] RNA polymerase sigma-F factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000547183 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACATAG AGGTCAGAAA TGAGAAGAAG AATCCTCAGT TAAAGGACCA CGAGTTAAAA GCGTTAATTC AAAAAAGTCA AGATGGAGAT CAAGGGGCGA GAGATACGAT TGTTCAAAGT AATATGCGCC TTGTATGGTC AGTTGTACAA CGTTTTCTCA ATCGAGGATA TGAACCCGAC GACTTATTTC AAATTGGCTG TATTGGCCTC TTGAAATCAG TAGACAAATT TGATTTATCT TTTGATGTGA AGTTTTCAAC TTACGCAGTT CCAATGATTA TTGGTGAAAT TCAACGTTTT TTACGTGATG ACGGTTCAGT AAAAGTGAGC CGATCGTTAA AAGAAACGGG TAATAAGATT CGAAAGATGA AAGATGAGCT TTCGAAAGAA TACGGAAGGG CACCAACCAT TAATGAAGTT GCAGAGGCGC TTGAACTAAC ACCGGAAGAA GTTGTTCTGG CGCAAGAGGC AAGTCGTACG CCATCTTCTA TACATGAAAC TGTATATGAA AATGATGGTG ATCCAATCAC GATTTTGGAT CAAATTGCGG ATCAAGCGGA AACGAAATGG TTTGATAAGA TTGCTTTAAA AGAAGCAATA AGAGAACTAG ATGAGCGAGA ACGCTTAATT GTATATTTGC GCTATTATAA AGATCAAACT CAATCGGAAG TAGCAGAGAG AATTGGAATT TCACAAGTGC AAGTTTCGAG GTTGGAAAAG AAAATATTGA AGCAGATGAA AGATCGGATA GATGAGTAG
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Protein sequence | MDIEVRNEKK NPQLKDHELK ALIQKSQDGD QGARDTIVQS NMRLVWSVVQ RFLNRGYEPD DLFQIGCIGL LKSVDKFDLS FDVKFSTYAV PMIIGEIQRF LRDDGSVKVS RSLKETGNKI RKMKDELSKE YGRAPTINEV AEALELTPEE VVLAQEASRT PSSIHETVYE NDGDPITILD QIADQAETKW FDKIALKEAI RELDERERLI VYLRYYKDQT QSEVAERIGI SQVQVSRLEK KILKQMKDRI DE
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