Gene Bcer98_2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_2260 
Symbol 
ID5346041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp2360126 
End bp2361025 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content35% 
IMG OID640839778 
ProductDNA polymerase III subunit epsilon 
Protein accessionYP_001375504 
Protein GI152975987 
COG category[L] Replication, recombination and repair 
COG ID[COG2176] DNA polymerase III, alpha subunit (gram-positive type) 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.155641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGATATG TATCTTTACC AGCAAATTAT GTTGTAATTG ATTTTGAGAC GACAGGTTTT 
CACCCATATA ACGATCGGAT CATTCAAGTA GCCGCAGTTC GATATCGCAA TCATGAATTA
GCAGACCAAT TTGTTTCATT CGTAAATCCA GAAAGATCGA TACCGAGTCG AATCACAAGC
TTAACAGGAA TTACGAACTA TCGTGTTTCA GATGCACCAA CTGTTCAAGA AGTGTTACCG
TTATTTTTAG CGTTTTTAGG TAACGATACA ATTGTTGCCC ACAACGCCTC TTTTGATATG
CGTTTTTTAA AAAGTAATAT GAGCAGATTT CAATTAGGAG AGCCGAACAA TAAGGTGATT
GACACAGTAC TTTTAGCTAA AAAATATATG AAACACGCTC CAAACTTTAA GCTGGAAACA
TTAAAAAGAA TGCTGGGTAT ACGATTAAGT TCCCATAATG CACTGGATGA TTGTATAACA
TGTGCAGCCG TTTATCAACA GTGTGCAAAT ATGCAAGGGG ACGGGCGAAA GAGTCTGAAA
AAAGAAGTAA TGGAAGAAGA GACTGTATAT ACGCTCATAA AAGAAATGCT AATAAAGAAT
AATCGTACAG TAGAGTATAT TCGTTATGTA AGTACCGGTA ATTATTTAGA TATAAAAGCT
TTTCAGTTAA TTGCGAGAAT GAAAGTGAAA GGGCGAAAAA AATATGTATT AACAGAAAAA
ACAGAACGAG AAATACAAGC AATCTGCGCG GATTTAAAAT GTGAACCAGC TTTAAAAAAT
GAATTAGGTA TAACGAGAAT TATGGTTGAA AGTTTAGAGG ATGTCATGAA ATTAGAAAGT
TATATTTTAG CTCGGTATGA TTTCCTACTA CAAGCTGCAC AGGAGTACAA TGAAATATAA
 
Protein sequence
MGYVSLPANY VVIDFETTGF HPYNDRIIQV AAVRYRNHEL ADQFVSFVNP ERSIPSRITS 
LTGITNYRVS DAPTVQEVLP LFLAFLGNDT IVAHNASFDM RFLKSNMSRF QLGEPNNKVI
DTVLLAKKYM KHAPNFKLET LKRMLGIRLS SHNALDDCIT CAAVYQQCAN MQGDGRKSLK
KEVMEEETVY TLIKEMLIKN NRTVEYIRYV STGNYLDIKA FQLIARMKVK GRKKYVLTEK
TEREIQAICA DLKCEPALKN ELGITRIMVE SLEDVMKLES YILARYDFLL QAAQEYNEI