Gene Bcer98_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_1400 
Symbol 
ID5344835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp1497780 
End bp1498574 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content38% 
IMG OID640838990 
Productshort chain dehydrogenase 
Protein accessionYP_001374716 
Protein GI152975199 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.473326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGAAAT TAGATGGAAA AATTGCTTTT GTTACTGGTG CTGCAATGGG AAATGGTGCG 
GGAATCGCTC ATGTATTTGC AGAATTAGGA GCGAAAGTAT TACTCGTTGA TATTTCCGAA
AAGGTTCATG AAACAGCAAA GGAAATTGTA AGTAACGGGT TAGAGGCAGC TAGTTATCAA
GTGGATGTAA CGGATTTTAC AGCCGTTAAA GAGATTGCAA AAGATGCATA TGAAAAATAT
GGGAAGATTG ATATATTGGT CAATAATGCG GGAGTCATTC GGCTTGCAAA TTTCTTAGAT
ATGTCGGATG ATATGCGTGA TTTTCAATTC CAAGTAAATA TTAATGGTGT GTGGAATTTT
GCAAAGGCTG TTTTACCATA TATGATTGAG AAAAATTACG GAAAAATTGT CAATATGTCG
TCTGTAACAG GAACGTTAGT GGCAGATGAA GGAGAAACAG CTTATGCGAC AACGAAAGCA
GCTATTTGGG GATTTACAAA AGCGTTGGCG CGTGAAGTAG CAAAACATAA TATAACTGTG
AATGCAATTT GTCCAGGTTA TATTATGACA CCGATGGCCG AACAAATTGC AAATGAATCT
GATCCAAATA AACCAAATAC TGTTATTGAT GGAATTGCAT CAGGCGTTCC ATTAGGACGA
TTAGGAAGAA TTGAAGAAGT TGGACAGCTA GCTGGTTTTC TTGCATCGGA TGAATCGAGT
TACATAACCG GAACACATAT CGTCATTGAT GGCGGCAGTA CATTACCAGA AACTATTTCT
GTTGGTGTGG AATAA
 
Protein sequence
MGKLDGKIAF VTGAAMGNGA GIAHVFAELG AKVLLVDISE KVHETAKEIV SNGLEAASYQ 
VDVTDFTAVK EIAKDAYEKY GKIDILVNNA GVIRLANFLD MSDDMRDFQF QVNINGVWNF
AKAVLPYMIE KNYGKIVNMS SVTGTLVADE GETAYATTKA AIWGFTKALA REVAKHNITV
NAICPGYIMT PMAEQIANES DPNKPNTVID GIASGVPLGR LGRIEEVGQL AGFLASDESS
YITGTHIVID GGSTLPETIS VGVE