Gene Bcer98_1273 details

Gene Information

• Locus tag: Bcer98_1273
• Symbol: recU
• ID: 5346099
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cytotoxicus NVH 391-98
• Kingdom: Bacteria
• Replicon accession: NC_009674
• Strand: -
• Start bp: 1381793
• End bp: 1382395
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 640838863
• Product: Holliday junction-specific endonuclease
• Protein accession: YP_001374590
• Protein GI: 152975073
• COG category: [R] General function prediction only
• COG ID: [COG3331] Penicillin-binding protein-related factor A, putative recombinase
• TIGRFAM ID: [TIGR00648] recombination protein U

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.381336
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCATTC GTTACCCAAA CGGAAAAAGA TATAATCAAG CTTTACAACC TCAAAAAACA 
AAAATGAAAA AACATACTTA TGGTAACAGG GGGATGTCTC TTGAAGAGGA ACTAAATGAA 
ACAAATCAAT ATTATTTGAG TCATAATATT GCCTGTGTAC ACAAAAAACC AACACCTCTT 
CAAATTGTAA AAGTGGATTA TCCTGCCCGA AGTGCTGCAG TTGTAAGAGA AGCTTATTTT 
AAACAGCCTT CTACAACAGA TTACAACGGT GTTTATAAGG GTAAATACAT TGATTTTGAA 
GCAAAGGAAA CAAAAAATAA AACAAACTTC CCGCTCCAAA ACTTCCATCT CCACCAAATT 
GAGCATATGA AACAAGTTAT TGCTCATGAT GGAATTGCAT TCGTCATTAT TAAATTTACA 
CTTTATAACG AAATTTATTT ACTCGATGCA AAACACGTTA TTTCATTTTG GAATCGCAAA 
GATACCGGAG GGAGAAAATC AATTACAAAA CAAGAAATTG AGGAACACGG CTCTTTGTTA 
TCATGCGGTT ATCATCCTCG AATCGATTAT ATTTCTATAC TAGACATGGT TTATTTTTCG 
TGA 

 

Protein sequence

MTIRYPNGKR YNQALQPQKT KMKKHTYGNR GMSLEEELNE TNQYYLSHNI ACVHKKPTPL 
QIVKVDYPAR SAAVVREAYF KQPSTTDYNG VYKGKYIDFE AKETKNKTNF PLQNFHLHQI 
EHMKQVIAHD GIAFVIIKFT LYNEIYLLDA KHVISFWNRK DTGGRKSITK QEIEEHGSLL 
SCGYHPRIDY ISILDMVYFS