Gene Bcer98_0949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_0949 
Symbol 
ID5346510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand
Start bp1063276 
End bp1064742 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content39% 
IMG OID640838548 
Productsodium/proline symporter 
Protein accessionYP_001374276 
Protein GI152974759 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000419009 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACGC AGATGTTAAC TTTAACTTCG ATCTCTATCT ACATGCTCGG GATGTTACTA 
ATTGGCTATT TCGCCTATAA ACAAACATCC AACTTAACAG ATTATATGCT TGGCGGGCGT
ACACTAGGCC CCGCAGTAAC AGCCTTAAGT GCTGGAGCAT CCGATATGAG CGGTTGGCTT
TTAATGGGCT TACCCGGTGC AATGTTTAGC GTTGGATTAA GCAGCAGCTG GATTGCGATT
GGCCTAACAC TTGGCGCATA CGCAAACTGG ATCTATGTTG CTCCTCGCTT ACGTATCTAC
TCTGAAATTG CAAATAACTC TATTACTATC CCAGAATTTT TAGAACATCG TTTCCACGAC
AAATCTCATA TGTTACGACT TGTATCTGGA CTTGTTATTA TGATTTTCTT TACTTTCTAT
GTAGCTTCTG GATTGGTTTC AGGTGCGGTC TTATTCCAAA ATTCATTTGG TATTAACTAT
CATATTGGAT TATTCATTGT CGCAGGTGTT GTTGTCGCTT ACACATTATT TGGTGGTTTC
TTAGCAGTAA GCTGGACAGA CTTCGTGCAA GGTATCATTA TGGTAGTAGC ACTTATTCTT
GTTCCAACCG TAACAATCAT GAATGTAAAT GGACTTGGTT CTGCATTTCA TACCATTCAA
TCCATCGATC CAACATTGTT AGATATATTT AAAGGTACTT CTGTATTAGG CATTATATCC
TTATTTGCAT GGGGTCTTGG TTATGTTGGA CAACCTCATA TTATCGTACG CTTTATGGCT
ATTTCTTCTG TTAAAGAAAT TAAAAGCGCA CGCCGAATTG GTATGAGCTG GATGGTTTTC
TCTGTTATTG GAGCTATGTT TACCGGTCTT ATTGGTATTG CTTATTATTC AAAATATGAT
TTAACATTAG CTAATCCGGA AACAATTTTC CTTGAATTAG GACGGATTTT ATTCCATCCA
CTCATTACTG GATTTTTATT AGCCGCCATT TTGGCAGCAA TTATGAGTAC AATCTCATCT
CAACTTCTCG TTACTTCAAG CGCAGTAACA GAGGACTTAT ATAGAACATT CTTTAAACGT
TCTGCTTCTG ATAAAGAACT TGTTTTTGTC GGTCGTATGG CGGTTCTCAT TATTGCACTG
ATCGGATGCG GATTGGCATA TAAACAAAAC GATACAATTC TAGCACTTGT TGGATATGCG
TGGGCTGGTT TCGGCTCTTC ATTTGGTCCT GCTATTTTAT TAAGTTTATA TTGGAAGCGC
ATGACAAAAT GGGGGGCGCT AGCTGGTATG ATTGCTGGAG CGGCAACTGT TATTACATGG
ACGCAATTTC CATTTTTAAA AGACTTCTTA TATGAAATGA TTCCAGGGTT CGCAGTCAGC
TTGCTTGTCA TTGTGGTTGT CAGCTTATTC ACAACACCTT CAAAAGAAGT CGAAAAGCAG
TTTGAAGAAT TTGAGAAAAC TGCATAA
 
Protein sequence
MSTQMLTLTS ISIYMLGMLL IGYFAYKQTS NLTDYMLGGR TLGPAVTALS AGASDMSGWL 
LMGLPGAMFS VGLSSSWIAI GLTLGAYANW IYVAPRLRIY SEIANNSITI PEFLEHRFHD
KSHMLRLVSG LVIMIFFTFY VASGLVSGAV LFQNSFGINY HIGLFIVAGV VVAYTLFGGF
LAVSWTDFVQ GIIMVVALIL VPTVTIMNVN GLGSAFHTIQ SIDPTLLDIF KGTSVLGIIS
LFAWGLGYVG QPHIIVRFMA ISSVKEIKSA RRIGMSWMVF SVIGAMFTGL IGIAYYSKYD
LTLANPETIF LELGRILFHP LITGFLLAAI LAAIMSTISS QLLVTSSAVT EDLYRTFFKR
SASDKELVFV GRMAVLIIAL IGCGLAYKQN DTILALVGYA WAGFGSSFGP AILLSLYWKR
MTKWGALAGM IAGAATVITW TQFPFLKDFL YEMIPGFAVS LLVIVVVSLF TTPSKEVEKQ
FEEFEKTA