| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcer98_0869 |
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| Symbol | rocD |
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| ID | 5346390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bacillus cytotoxicus NVH 391-98 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009674 |
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| Strand | - |
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| Start bp | 986186 |
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| End bp | 987376 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640838471 |
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| Product | ornithine--oxo-acid transaminase |
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| Protein accession | YP_001374199 |
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| Protein GI | 152974682 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR01885] ornithine aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.523488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAA CAAAGGATAT TATTGAACTT ACAGACACAT ACGGAGCTAA CAACTACCAC
CCACTTCCAA TCGTAATCGC AAAAGCTGAA GGTGTCTGGG TAGAAGATCC TGAAGGTAAT
CGTTATATGG ACCTACTTAG TGCATATTCT GCAGTAAACC AAGGACATCG TCATCCAAAG
ATTATCAATG CTTTAATTGA ACAGGCAAAT CGCGTTACAC TTACTTCACG TGCTTTCCAT
AGCGACCAAT TAGGCCCTTG GTATGAAAAA GTAGCACAAC TTACTCATAA AGATATGATT
CTTCCAATGA ATACAGGCGC GGAAGCTGTT GAAACTGCAA TCAAAACAGC ACGCCGCTGG
GCATATGATG TGAAAAAAGT AGAAGAAAAT AAGGCTGAAA TTATCGTTTG TGAAGACAAC
TTCCACGGAC GTACAATGGG CGCAGTTTCT ATGTCGTCCA ACGATGAATA TAAACGCGGA
TTTGGCCCAA TGCTTCCTGG TATTATCGTA ATCCCTTACG GCGATTTAGA AGCATTAAAA
GCGGCTATTA CACCGAATAC AGCAGCATTT ATTTTAGAAC CAATTCAAGG TGAAGCTGGC
ATCAACATTC CACCAGCTAG ATTCTTAAAA GAAGCATATG ATGTATGTAA GAAAGAGAAT
GTTCTATTTG TTGCAGATGA AATTCAAACA GGACTAGGCC GTACTGGTAA GCTATTTGCA
TGTGATTGGG ACGAGGTCAT CCCTGATATG TATATCCTTG GTAAAGCACT AGGCGGCGGC
GTATTCCCAA TTTCTTGTGT TGCAGCAAAC CGCGATATTC TAGGCGTATT TGAACCAGGT
TCTCACGGTT CTACATTCGG CGGTAATCCA CTTGCATGTG CCGTTTCGAT TGCCGCTCTC
GATGTATTAC AAGATGAAAG ATTAACAGAG CGCTCTCTTC AACTAGGAGA AAAATTAATC
GGCCAATTAA AAGAAATTAA GAATCCTATG ATTAAAGAAG TTCGTGGTAA AGGATTATTT
ATTGGAATCG AATTAAATAC GCCTGCTCGT CCATATTGCG AGAAATTAAA AGAAGAAGGC
TTACTATGTA AAGAAACTCA TGAGAATGTC ATTCGCATCG CACCACCTCT TGTTATTTCT
GAAGACGATT TAGAGTGGGC GTTCCAAAAA ATTAAAGCTG TATTATCTTA A
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| Protein sequence | MIETKDIIEL TDTYGANNYH PLPIVIAKAE GVWVEDPEGN RYMDLLSAYS AVNQGHRHPK
IINALIEQAN RVTLTSRAFH SDQLGPWYEK VAQLTHKDMI LPMNTGAEAV ETAIKTARRW
AYDVKKVEEN KAEIIVCEDN FHGRTMGAVS MSSNDEYKRG FGPMLPGIIV IPYGDLEALK
AAITPNTAAF ILEPIQGEAG INIPPARFLK EAYDVCKKEN VLFVADEIQT GLGRTGKLFA
CDWDEVIPDM YILGKALGGG VFPISCVAAN RDILGVFEPG SHGSTFGGNP LACAVSIAAL
DVLQDERLTE RSLQLGEKLI GQLKEIKNPM IKEVRGKGLF IGIELNTPAR PYCEKLKEEG
LLCKETHENV IRIAPPLVIS EDDLEWAFQK IKAVLS
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